OPUNC03G06340 (Oryza punctata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 OPUNC03G06340 T163302_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.830 0.830
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.790 0.790
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC03G06340.1 CG-1 94 194
OPUNC03G06340.2 CG-1 21 121
OPUNC03G06340.3 CG-1 21 121

Links

Other CG-1 family TFs
Other Oryza punctata TFs

Invalid Input OrderBy

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action