CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHLREDRAFT_126810
(
Chlamydomonas reinhardtii
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
CHLREDRAFT_126810
T164357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP08495
CSD
7
73
QQGTVKWFNATKGFGFITPGGGGEDLFVHQTNINSEGFRSLREGEVVEFEVEAGPDGRSKAVNVTGP
Links
Other
CSD
family TFs
Other
Chlamydomonas reinhardtii
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_10818
Volvox carteri
estExt_Genewise1Plus.C_10818
N
0.894
IGS.gm_9_00317
Chlorella NC64A
IGS.gm_9_00317
N
0.803
AMTR_s00017p00206510
Amborella trichopoda
AMTR_s00017p00206510
N
0.758
gw1.103.78.1
Physcomitrella patens
gw1.103.78.1
N
0.758
estExt_fgenesh1_pg.C_10541
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pg.C_10541
N
0.758
estExt_fgeneshCV_pm.C_10002
Chlorella vulgaris
estExt_fgeneshCV_pm.C_10002
N
0.758
GRMZM2G389768
Zea mays
GRMZM2G389768
N
0.742
Sb04g001720
Sorghum bicolor
Sb04g001720
N
0.742
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I
0.742
estExt_gwp_gw1.C_410063
Physcomitrella patens
estExt_gwp_gw1.C_410063
N
0.742
estExt_gwp_gw1.C_640002
Physcomitrella patens
estExt_gwp_gw1.C_640002
N
0.742
fgenesh1_pg.1_#_433
Coccomyxa subellipsoidea C169
fgenesh1_pg.1_#_433
N
0.742
Pavir.J33226
Panicum virgatum
Pavir.J33226
N
0.742
Pavir.J33349
Panicum virgatum
Pavir.J33349
N
0.742
e_gw1.1.536.1
Chlorella vulgaris
e_gw1.1.536.1
N
0.742
Traes_6AS_539B381F1
Triticum aestivum
Traes_6AS_539B381F1
N
0.727
mgf015980m
Mimulus guttatus
mgf015980m
I
0.727
Pavir.Ab00211
Panicum virgatum
Pavir.Ab00211
N
0.714
BRADI3G01960
Brachypodium distachyon
BRADI3G01960
N
0.712
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
0.712
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
0.712
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.712
mgf001526m
Mimulus guttatus
mgf001526m
N
0.712
mgf014458m
Mimulus guttatus
mgf014458m
N
0.712