CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla016088
(
Citrullus lanatus
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Cla016088
T165297_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla016088
CSD
5
71
VSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Links
Other
CSD
family TFs
Other
Citrullus lanatus
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm020837
Prunus mume
Pm020837
I
0.788
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I
0.773
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
0.727
Gorai.002G195000
Gossypium raimondii
Gorai.002G195000
I
0.758
Gorai.002G195100
Gossypium raimondii
Gorai.002G195100
I
0.758
Gorai.005G253200
Gossypium raimondii
Gorai.005G253200
I
0.773
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
0.727
Lus10025058.g
Linum usitatissimum
Lus10025058.g
N
0.712
Bostr.18351s0255
Boechera stricta
Bostr.18351s0255
N
0.742
Cagra.3126s0019
Capsella grandiflora
Cagra.3126s0019
N
0.712
Carubv10015336m.g
Capsella rubella
Carubv10015336m.g
N
0.712
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
0.707
evm.TU.supercontig_37.170
Carica papaya
evm.TU.supercontig_37.170
N
0.803
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
0.742
Gorai.002G003500
Gossypium raimondii
Gorai.002G003500
N
0.742
Lus10005066.g
Linum usitatissimum
Lus10005066.g
N
0.758
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.803
Lus10027839.g
Linum usitatissimum
Lus10027839.g
N
0.758
MDP0000121628
Malus domestica
MDP0000121628
N
0.727
MDP0000155077
Malus domestica
MDP0000155077
N
0.758
MDP0000198079
Malus domestica
MDP0000198079
N
0.712
MDP0000202739
Malus domestica
MDP0000202739
N
0.758
MDP0000225222
Malus domestica
MDP0000225222
N
0.773
MDP0000632148
Malus domestica
MDP0000632148
N
0.712
Pavir.J33226
Panicum virgatum
Pavir.J33226
N
0.712
Pavir.J33349
Panicum virgatum
Pavir.J33349
N
0.712
SapurV1A.0117s0150
Salix purpurea
SapurV1A.0117s0150
N
0.773
SapurV1A.0514s0160
Salix purpurea
SapurV1A.0514s0160
N
0.727
Thhalv10022795m.g
Eutrema salsugineum
Thhalv10022795m.g
N
0.712
PK03316.1
Cannabis sativa
PK03316.1
N
0.742
chr3.CM0112.180.nd
Lotus japonicus
chr3.CM0112.180.nd
N
0.712
chr6.CM0045.280.nd
Lotus japonicus
chr6.CM0045.280.nd
N
0.712
ORUFI02G01580
Oryza rufipogon
ORUFI02G01580
N
0.727
BRADI1G02640
Brachypodium distachyon
BRADI1G02640
N
0.712
BRADI3G01960
Brachypodium distachyon
BRADI3G01960
N
0.742
GLYMA04G00660
Glycine max
GLYMA04G00660
N
0.742
GLYMA11G11290
Glycine max
GLYMA11G11290
N
0.788
GLYMA12G03470
Glycine max
GLYMA12G03470
N
0.803
GRMZM2G389768
Zea mays
GRMZM2G389768
N
0.712
LPERR02G01370
Leersia perrieri
LPERR02G01370
N
0.727
OBART02G01600
Oryza barthii
OBART02G01600
N
0.727
OGLUM02G01470
Oryza glumaepatula
OGLUM02G01470
N
0.727
OMERI02G00930
Oryza meridionalis
OMERI02G00930
N
0.727
ONIVA02G01490
Oryza nivara
ONIVA02G01490
N
0.727
OPUNC02G01060
Oryza punctata
OPUNC02G01060
N
0.727
ORGLA02G0014700
Oryza glaberrima
ORGLA02G0014700
N
0.727
Cucsa.381750
Cucumis sativus
Cucsa.381750
N
1.000
OS02G0121100
Oryza sativa
OS02G0121100
N
0.727
PGSC0003DMG400001590
Solanum tuberosum
PGSC0003DMG400001590
N
0.742
POPTR_0004s17840
Populus trichocarpa
POPTR_0004s17840
N
0.758
POPTR_0009s13460
Populus trichocarpa
POPTR_0009s13460
N
0.727
Sb04g001720
Sorghum bicolor
Sb04g001720
N
0.712
SELMODRAFT_186937
Selaginella moellendorffii
SELMODRAFT_186937
N
0.727
SELMODRAFT_187582
Selaginella moellendorffii
SELMODRAFT_187582
N
0.727
Solyc01g111300.2
Solanum lycopersicum
Solyc01g111300.2
N
0.758
VIT_04s0023g03520
Vitis vinifera
VIT_04s0023g03520
N
0.773
Ca_11038
Cicer arietinum
Ca_11038
N
0.742
BGIOSGA007226
Oryza indica
BGIOSGA007226
N
0.727
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.788