CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene07618-v1.0-hybrid
(
Fragaria vesca
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
gene07618-v1.0-hybrid
T165446_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna07618.1-v1.0-hybrid
CSD
75
141
LTGTVKWFNDQKGFGFITPENGGEDLFVHQSSIRTEGFRTLGDGESVEFQIETDNDGRTKAVDVTGP
Links
Other
CSD
family TFs
Other
Fragaria vesca
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm020837
Prunus mume
Pm020837
I
0.909
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.848
gene26519-v1.0-hybrid
Fragaria vesca
gene26519-v1.0-hybrid
N
0.848
MDP0000225222
Malus domestica
MDP0000225222
N
0.848
MDP0000155077
Malus domestica
MDP0000155077
N
0.833
MDP0000202739
Malus domestica
MDP0000202739
N
0.833
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I
0.818
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.818
evm.TU.supercontig_37.170
Carica papaya
evm.TU.supercontig_37.170
N
0.818
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
0.793
Lus10005066.g
Linum usitatissimum
Lus10005066.g
N
0.788
Lus10027839.g
Linum usitatissimum
Lus10027839.g
N
0.788
PK03316.1
Cannabis sativa
PK03316.1
N
0.788
PK11650.1
Cannabis sativa
PK11650.1
N
0.786
VIT_04s0023g03520
Vitis vinifera
VIT_04s0023g03520
N
0.773
Gorai.005G253200
Gossypium raimondii
Gorai.005G253200
I
0.773
SapurV1A.0117s0150
Salix purpurea
SapurV1A.0117s0150
N
0.773
BRADI3G01960
Brachypodium distachyon
BRADI3G01960
N
0.758
PGSC0003DMG400001590
Solanum tuberosum
PGSC0003DMG400001590
N
0.758
Solyc01g111300.2
Solanum lycopersicum
Solyc01g111300.2
N
0.758
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
0.758
Ca_11038
Cicer arietinum
Ca_11038
N
0.758
PK26692.1
Cannabis sativa
PK26692.1
I
0.745
GRMZM2G389768
Zea mays
GRMZM2G389768
N
0.742
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
0.742
POPTR_0004s17840
Populus trichocarpa
POPTR_0004s17840
N
0.742
POPTR_0009s13460
Populus trichocarpa
POPTR_0009s13460
N
0.742
Sb04g001720
Sorghum bicolor
Sb04g001720
N
0.742
Cla016088
Citrullus lanatus
Cla016088
N
0.742
Cucsa.381750
Cucumis sativus
Cucsa.381750
N
0.742
estExt_fgenesh1_pg.C_10541
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pg.C_10541
N
0.742
fgenesh1_pg.1_#_433
Coccomyxa subellipsoidea C169
fgenesh1_pg.1_#_433
N
0.742
Lus10025058.g
Linum usitatissimum
Lus10025058.g
N
0.742
Pavir.J33226
Panicum virgatum
Pavir.J33226
N
0.742
Pavir.J33349
Panicum virgatum
Pavir.J33349
N
0.742
SapurV1A.0514s0160
Salix purpurea
SapurV1A.0514s0160
N
0.742
e_gw1.1.536.1
Chlorella vulgaris
e_gw1.1.536.1
N
0.742
estExt_fgeneshCV_pm.C_10002
Chlorella vulgaris
estExt_fgeneshCV_pm.C_10002
N
0.742
BGIOSGA007226
Oryza indica
BGIOSGA007226
N
0.727
Bo3g141510
Brassica oleracea
Bo3g141510
I
0.727
GLYMA11G11290
Glycine max
GLYMA11G11290
N
0.727
LPERR02G01370
Leersia perrieri
LPERR02G01370
N
0.727
OBART02G01600
Oryza barthii
OBART02G01600
N
0.727
OGLUM02G01470
Oryza glumaepatula
OGLUM02G01470
N
0.727
OMERI02G00930
Oryza meridionalis
OMERI02G00930
N
0.727
ONIVA02G01490
Oryza nivara
ONIVA02G01490
N
0.727
OPUNC02G01060
Oryza punctata
OPUNC02G01060
N
0.727
ORGLA02G0014700
Oryza glaberrima
ORGLA02G0014700
N
0.727
ORUFI02G01580
Oryza rufipogon
ORUFI02G01580
N
0.727
OS02G0121100
Oryza sativa
OS02G0121100
N
0.727
SELMODRAFT_186937
Selaginella moellendorffii
SELMODRAFT_186937
N
0.727
SELMODRAFT_187582
Selaginella moellendorffii
SELMODRAFT_187582
N
0.727
Traes_6AS_539B381F1
Triticum aestivum
Traes_6AS_539B381F1
N
0.727
gw1.103.78.1
Physcomitrella patens
gw1.103.78.1
N
0.727
mgf001526m
Mimulus guttatus
mgf001526m
N
0.727
mgf014458m
Mimulus guttatus
mgf014458m
N
0.727
mgf015980m
Mimulus guttatus
mgf015980m
I
0.727
Gorai.002G003500
Gossypium raimondii
Gorai.002G003500
N
0.727
MDP0000121628
Malus domestica
MDP0000121628
N
0.727
MDP0000198079
Malus domestica
MDP0000198079
N
0.727
MDP0000632148
Malus domestica
MDP0000632148
N
0.727
IGS.gm_9_00317
Chlorella NC64A
IGS.gm_9_00317
N
0.721
OB02G23180
Oryza brachyantha
OB02G23180
I
0.718
Pavir.Ab00211
Panicum virgatum
Pavir.Ab00211
N
0.714
AMTR_s00017p00206510
Amborella trichopoda
AMTR_s00017p00206510
N
0.712
Bo7g049880
Brassica oleracea
Bo7g049880
I
0.712
BRADI1G02650
Brachypodium distachyon
BRADI1G02650
N
0.712
GLYMA04G00660
Glycine max
GLYMA04G00660
N
0.712
GLYMA12G03470
Glycine max
GLYMA12G03470
N
0.712
PRUPE_ppa010531mg
Prunus persica
PRUPE_ppa010531mg
N
0.712
Pm026767
Prunus mume
Pm026767
N
0.712
estExt_gwp_gw1.C_410063
Physcomitrella patens
estExt_gwp_gw1.C_410063
N
0.712
estExt_gwp_gw1.C_640002
Physcomitrella patens
estExt_gwp_gw1.C_640002
N
0.712
PK01533.1
Cannabis sativa
PK01533.1
N
0.712