MDP0000121628 (Malus domestica)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 MDP0000121628 T165468_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000121628 CSD 6 72

Links

Other CSD family TFs
Other Malus domestica TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000198079 Malus domestica MDP0000198079 N 0.939
MDP0000632148 Malus domestica MDP0000632148 N 0.939
MDP0000292743 Malus domestica MDP0000292743 N 0.879
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.818
Pm026767 Prunus mume Pm026767 N 0.818
gene14603-v1.0-hybrid Fragaria vesca gene14603-v1.0-hybrid N 0.803
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.788
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.773
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.773
PK01533.1 Cannabis sativa PK01533.1 N 0.773
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.758
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.758
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.758
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.758
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.758
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.758
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.742
Ca_11038 Cicer arietinum Ca_11038 N 0.742
chr4.CM0119.380.nc Lotus japonicus chr4.CM0119.380.nc N 0.742
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.727
Bo7g117730 Brassica oleracea Bo7g117730 N 0.727
Bra017742 Brassica rapa Bra017742 N 0.727
GLYMA02G05335 Glycine max GLYMA02G05335 N 0.727
GLYMA04G00660 Glycine max GLYMA04G00660 N 0.727
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.727
GLYMA16G23695 Glycine max GLYMA16G23695 N 0.727
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.727
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.727
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.727
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.727
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.727
OS02G0121100 Oryza sativa OS02G0121100 N 0.727
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.727
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.727
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.727
Cla016088 Citrullus lanatus Cla016088 N 0.727
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.727
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.727
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 0.727
Carubv10015336m.g Capsella rubella Carubv10015336m.g N 0.727
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.727
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.727
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.727
MDP0000225222 Malus domestica MDP0000225222 N 0.727
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.727
PK03316.1 Cannabis sativa PK03316.1 N 0.727
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.727
CSP3 Arabidopsis thaliana AT2G17870 N 0.712
Bo7g012920 Brassica oleracea Bo7g012920 N 0.712
Bra002099 Brassica rapa Bra002099 N 0.712
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.712
CSDP1 Arabidopsis lyrata fgenesh2_kg.7__465__AT4G36020.1 N 0.712
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.712
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.712
OBART02G01600 Oryza barthii OBART02G01600 N 0.712
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.712
Pm020837 Prunus mume Pm020837 I 0.712
evm.TU.supercontig_6.261 Carica papaya evm.TU.supercontig_6.261 N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.712
MDP0000202739 Malus domestica MDP0000202739 N 0.712
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.712
Thhalv10026001m.g Eutrema salsugineum Thhalv10026001m.g N 0.712