CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000632148
(
Malus domestica
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
MDP0000632148
T165475_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000632148
CSD
6
72
STGKVRWFNDVKGYGFITPDAGGEDLFVHQSSIRSDGFRTVAEGESVEFLIDFGDDGKTKAIDVTGP
Links
Other
CSD
family TFs
Other
Malus domestica
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000198079
Malus domestica
MDP0000198079
N
1.000
MDP0000121628
Malus domestica
MDP0000121628
N
0.939
PRUPE_ppa010531mg
Prunus persica
PRUPE_ppa010531mg
N
0.848
Pm026767
Prunus mume
Pm026767
N
0.848
MDP0000292743
Malus domestica
MDP0000292743
N
0.848
gene14603-v1.0-hybrid
Fragaria vesca
gene14603-v1.0-hybrid
N
0.788
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.758
VIT_04s0023g03520
Vitis vinifera
VIT_04s0023g03520
N
0.742
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.742
Bostr.18351s0255
Boechera stricta
Bostr.18351s0255
N
0.742
Cagra.3126s0019
Capsella grandiflora
Cagra.3126s0019
N
0.742
Carubv10015336m.g
Capsella rubella
Carubv10015336m.g
N
0.742
PK01533.1
Cannabis sativa
PK01533.1
N
0.742
CSP3
Arabidopsis thaliana
AT2G17870
N
0.727
BRADI3G01960
Brachypodium distachyon
BRADI3G01960
N
0.727
GLYMA04G00660
Glycine max
GLYMA04G00660
N
0.727
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I
0.727
Ca_11038
Cicer arietinum
Ca_11038
N
0.727
evm.TU.supercontig_37.170
Carica papaya
evm.TU.supercontig_37.170
N
0.727
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
0.727
Lus10005066.g
Linum usitatissimum
Lus10005066.g
N
0.727
Lus10027839.g
Linum usitatissimum
Lus10027839.g
N
0.727
Bo7g117730
Brassica oleracea
Bo7g117730
N
0.712
Bra017742
Brassica rapa
Bra017742
N
0.712
GLYMA11G11290
Glycine max
GLYMA11G11290
N
0.712
ONIVA02G01490
Oryza nivara
ONIVA02G01490
N
0.712
SELMODRAFT_186937
Selaginella moellendorffii
SELMODRAFT_186937
N
0.712
SELMODRAFT_187582
Selaginella moellendorffii
SELMODRAFT_187582
N
0.712
Cla016088
Citrullus lanatus
Cla016088
N
0.712
Cucsa.381750
Cucumis sativus
Cucsa.381750
N
0.712
Gorai.002G003500
Gossypium raimondii
Gorai.002G003500
N
0.712
Thhalv10022795m.g
Eutrema salsugineum
Thhalv10022795m.g
N
0.712
chr4.CM0119.380.nc
Lotus japonicus
chr4.CM0119.380.nc
N
0.712