chr3.CM0112.180.nd (Lotus japonicus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 chr3.CM0112.180.nd T165601_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0112.180.nd CSD 6 72

Links

Other CSD family TFs
Other Lotus japonicus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.864
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.818
mgf015980m Mimulus guttatus mgf015980m I 0.803
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.788
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.773
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.773
mgf001526m Mimulus guttatus mgf001526m N 0.773
mgf014458m Mimulus guttatus mgf014458m N 0.773
Ca_11038 Cicer arietinum Ca_11038 N 0.758
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.742
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.742
Pm020837 Prunus mume Pm020837 I 0.742
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.742
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.742
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.727
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.727
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.727
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.727
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.727
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.727
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.727
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.727
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.727
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.712
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.712
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.712
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.712
Cla016088 Citrullus lanatus Cla016088 N 0.712
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.712
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.712
MDP0000202739 Malus domestica MDP0000202739 N 0.712
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.712
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.712
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.707
PK26692.1 Cannabis sativa PK26692.1 I 0.702