CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGTG_18855
(
Puccinia graminis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
PGTG_18855
T166229_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFP93014
CSL
450
609
VLVLSGKVAQKSYGAEKRFLCPPPSALLLGCSWWAAADADPRRPMPSSNRLALHPPTTIVSMSGEHSIPTEAYSEWMSMSGHVVGDQASLDDVVIAGRCVGKQLHISEVDEKTKKVEALVRVIAPGFGPPEARHIGTFPSKPIKVISKPSKKRQSIKNLD
Links
Other
CSL
family TFs
Other
Puccinia graminis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGTG_09016
Puccinia graminis
PGTG_09016
N
1.000
PTTG_03030
Puccinia triticina
PTTG_03030
N
0.907
MELLADRAFT_116290
Melampsora laricipopulina
MELLADRAFT_116290
N
0.873
GLOINDRAFT_27407
Rhizophagus irregularis
GLOINDRAFT_27407
N
0.737