CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB010819
(
Biomphalaria glabrata
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
BGLB010819
T166376_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.941
0.941
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.941
0.941
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.912
0.912
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.912
0.912
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.912
0.912
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.912
0.912
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.912
0.912
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.912
0.912
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.912
0.912
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.912
0.912
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.912
0.912
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.912
0.912
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.912
0.912
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.912
0.912
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.912
0.912
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB010819-PA
CSL
1
34
MFYGNGQDIGVFQSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Biomphalaria glabrata
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DAPPUDRAFT_98470
Daphnia pulex
DAPPUDRAFT_98470
I
0.971
AAEL006419
Aedes aegypti
AAEL006419
I
0.941
Su(H)
Drosophila melanogaster
FBgn0004837
D
0.941
Su(H)
Drosophila simulans
FBgn0027417
I
0.941
GF14905
Drosophila ananassae
FBgn0091930
I
0.941
GG25142
Drosophila erecta
FBgn0117267
I
0.941
GH10915
Drosophila grimshawi
FBgn0118396
I
0.941
GL26026
Drosophila persimilis
FBgn0163608
I
0.941
GM15894
Drosophila sechellia
FBgn0170810
I
0.941
GJ11880
Drosophila virilis
FBgn0199134
I
0.941
GE20814
Drosophila yakuba
FBgn0238107
I
0.941
GA25242
Drosophila pseudoobscura
FBgn0246623
I
0.941
GA25243
Drosophila pseudoobscura
FBgn0246624
I
0.941
NV17858
Nasonia vitripennis
NV17858
I
0.941
SMAR001432
Strigamia maritima
SMAR001432
I
0.941
AALB007981
Anopheles albimanus
AALB007981
I
0.941
ASTEI01929
Anopheles stephensi
ASTEI01929
I
0.941
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
0.912
rbpja
Danio rerio
ENSDARG00000003398
I
0.912
rbpjb
Danio rerio
ENSDARG00000052091
I
0.912
MCINX002989
Melitaea cinxia
MCINX002989
I
0.912
TC014468
Tribolium castaneum
TC014468
I
0.912
LDEC018359
Leptinotarsa decemlineata
LDEC018359
I
0.912
ECPE_0000417601
Echinostoma caproni
ECPE_0000417601
N
0.794
PXEA_0000033201
Protopolystoma xenopodis
PXEA_0000033201
N
0.794
SCUD_0001384301
Schistosoma curassoni
SCUD_0001384301
N
0.794
TASK_0000348801
Taenia asiatica
TASK_0000348801
N
0.794
WUBG_04020
Wuchereria bancrofti
WUBG_04020
N
0.735
Bm4897
Brugia malayi
Bm4897
N
0.735
ENSCSAVG00000001400
Ciona savignyi
ENSCSAVG00000001400
N
0.735
RBPJL
Gallus gallus
ENSGALG00000003952
I
0.735
RBPJL
Meleagris gallopavo
ENSMGAG00000017264
I
0.735
Aan_R003297
Calypte anna
Aan_R003297
N
0.735
Cmyd_10015219
Chelonia mydas
Cmyd_10015219
I
0.735
BTMF_0000608501
Brugia timori
BTMF_0000608501
I
0.735
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.735
Hba_17078
Heterorhabditis bacteriophora
Hba_17078
N
0.735
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.735
SSTP_0000504800
Strongyloides stercoralis
SSTP_0000504800
N
0.735
TELCIR_20071
Teladorsagia circumcincta
TELCIR_20071
N
0.735