CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf05143-augustus-gene-0.4
(
Meloidogyne floridensis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
maker-nMf.1.1.scaf05143-augustus-gene-0.4
T166446_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf05143-augustus-gene-0.4-mRNA-1
CSL
76
235
VMIYHAKVAQKSYGAEKRFFCPPPMVYLRGKGWKIRGLIAQNGPDVSHNVTGLNNIIGWSNDETSTNNTDYDYEEPRAFIGIVGAKDQDRHALEWQKDSCGRCAIKALHISENDNNRRKYFTLSVHCFYKSGQLLGKFESKRIKVISKPSKKKNITLSAN
Links
Other
CSL
family TFs
Other
Meloidogyne floridensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf36774-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf36774-processed-gene-0.2
N
0.956
MhA1_Contig100.frz3.gene18
Meloidogyne hapla
MhA1_Contig100.frz3.gene18
N
0.946
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.833
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.824
RBPJ
Homo sapiens
ENSG00000168214
D
0.812
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.765
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.714