CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tfdp1a
(
Danio rerio
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSDARG00000019293
T172534_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.941
0.941
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.941
0.941
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.765
0.765
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000072266
E2F
111
193
NGKGLRHFSMKVCEKVQRKGVTTYNEVADELVAEFSSGDNHISPNDAHVYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIG
ENSDARP00000105214
E2F
111
188
NGKGLRHFSMKVCEKVQRKGVTTYNEVADELVAEFSSGDNHISPNDAHVYDQKNIRRRVYDALNVLMAMNIISKEKKE
ENSDARP00000112589
E2F
111
193
NGKGLRHFSMKVCEKVQRKGVTTYNEVADELVAEFSSGDNHISPNDAHVYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIG
Links
Other
E2F
family TFs
Other
Danio rerio
TFs
576 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L3MBTL3
Anolis carolinensis
ENSACAG00000014140
N
ENSAMEG00000007825
Ailuropoda melanoleuca
ENSAMEG00000007825
N
ENSAPLG00000011121
Anas platyrhynchos
ENSAPLG00000011121
N
L3MBTL3
Bos taurus
ENSBTAG00000017393
N
L3MBTL3
Choloepus hoffmanni
ENSCHOG00000011296
N
L3MBTL3
Callithrix jacchus
ENSCJAG00000003235
N
L3MBTL3
Cavia porcellus
ENSCPOG00000006280
N
ENSCSAG00000016589
Chlorocebus sabaeus
ENSCSAG00000016589
N
L3MBTL3
Dasypus novemcinctus
ENSDNOG00000019298
N
L3mbtl3
Dipodomys ordii
ENSDORG00000013929
N
L3MBTL3
Equus caballus
ENSECAG00000006343
N
L3MBTL3
Erinaceus europaeus
ENSEEUG00000008805
N
ENSFALG00000011622
Ficedula albicollis
ENSFALG00000011622
N
L3MBTL3
Felis catus
ENSFCAG00000001466
N
L3MBTL3
Homo sapiens
ENSG00000198945
N
ENSGALG00000014009
Gallus gallus
ENSGALG00000014009
N
L3MBTL3
Gorilla gorilla
ENSGGOG00000000549
N
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
L3MBTL3
Loxodonta africana
ENSLAFG00000014675
N
ENSMEUG00000014341
Macropus eugenii
ENSMEUG00000014341
N
L3MBTL3
Meleagris gallopavo
ENSMGAG00000013190
N
L3MBTL3
Microcebus murinus
ENSMICG00000006114
N
L3MBTL3
Myotis lucifugus
ENSMLUG00000012323
N
L3MBTL3
Macaca mulatta
ENSMMUG00000021498
N
L3MBTL3
Monodelphis domestica
ENSMODG00000017623
N
ENSMPUG00000014637
Mustela putorius furo
ENSMPUG00000014637
N
ENSNLEG00000026803
Nomascus leucogenys
ENSNLEG00000026803
N
ENSOARG00000013771
Ovis aries
ENSOARG00000013771
N
L3MBTL3
Oryctolagus cuniculus
ENSOCUG00000016226
N
L3MBTL3
Otolemur garnettii
ENSOGAG00000001632
N
L3MBTL3
Ochotona princeps
ENSOPRG00000003872
N
ENSP00000354526-D1
Bos grunniens
ENSP00000354526-D1
N
ENSP00000357118
Macaca fascicularis
ENSP00000357118
N
ENSPANG00000010327
Papio anubis
ENSPANG00000010327
N
ENSPPYG00000017002
Pongo abelii
ENSPPYG00000017002
N
L3MBTL3
Pan troglodytes
ENSPTRG00000023858
N
L3MBTL3
Sorex araneus
ENSSARG00000012237
N
ENSSHAG00000017557
Sarcophilus harrisii
ENSSHAG00000017557
N
L3MBTL3
Sus scrofa
ENSSSCG00000004203
N
ENSSTOG00000009978
Ictidomys tridecemlineatus
ENSSTOG00000009978
N
L3MBTL3
Tupaia belangeri
ENSTBEG00000013158
N
L3MBTL3
Taeniopygia guttata
ENSTGUG00000011709
N
ENSTSYG00000008001
Tarsius syrichta
ENSTSYG00000008001
N
L3MBTL3
Tursiops truncatus
ENSTTRG00000010125
N
L3MBTL3
Vicugna pacos
ENSVPAG00000002988
N
Gfo_R016211
Geospiza fortis
Gfo_R016211
N
Myotis_brandtii_L3MBTL3_10035664
Myotis brandtii
Myotis_brandtii_L3MBTL3_10035664
N
Pvit_01718
Pogona vitticeps
Pvit_01718
N