CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA06G19843
(
Glycine max
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
GLYMA06G19843
T173138_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.838
0.838
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.838
0.838
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.838
0.838
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.669
0.669
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.669
0.669
E2FD
M10442_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.669
0.669
E2FD
M10443_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.669
0.669
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.581
0.581
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.581
0.581
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.581
0.581
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.581
0.581
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.581
0.581
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.581
0.581
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.566
0.566
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.566
0.566
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.566
0.566
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G19843.1
E2F
72
136
KQKSLGLLCTNFLSLYNKEGVRLVGLDDAASRLGVERRRIYDIVNVLESVGVLTRKAKNQYTWKG
GLYMA06G19843.1
E2F
208
283
REKSLALLTQNFVKLFVCSNFEMISLDEAAKLLLGNANNRTKVRRLYDIANVLSSMNLIEKTHTTNTRKPAFRWLG
Links
Other
E2F
family TFs
Other
Glycine max
TFs
330 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000792
Aedes aegypti
AAEL000792
I
AALB009865
Anopheles albimanus
AALB009865
I
AALB009868
Anopheles albimanus
AALB009868
I
AARA000827
Anopheles arabiensis
AARA000827
I
AARA005391
Anopheles arabiensis
AARA005391
I
AARA005393
Anopheles arabiensis
AARA005393
I
AARA011914
Anopheles arabiensis
AARA011914
I
AATE006542
Anopheles atroparvus
AATE006542
N
AATE012157
Anopheles atroparvus
AATE012157
N
ACAC_0000143401
Angiostrongylus cantonensis
ACAC_0000143401
N
ACEP10855
Atta cephalotes
ACEP10855
I
ACEP10859
Atta cephalotes
ACEP10859
I
ACEP25270
Atta cephalotes
ACEP25270
N
ACEP25857
Atta cephalotes
ACEP25857
I
ACHR009359
Anopheles christyi
ACHR009359
I
ACOM022800
Anopheles coluzzii
ACOM022800
I
ACOM022803
Anopheles coluzzii
ACOM022803
I
ACOM026664
Anopheles coluzzii
ACOM026664
N
ACOM034662
Anopheles coluzzii
ACOM034662
I
ACUA008554
Anopheles culicifacies
ACUA008554
I
ACUA011783
Anopheles culicifacies
ACUA011783
N
ACUA026266
Anopheles culicifacies
ACUA026266
I
ACUA026638
Anopheles culicifacies
ACUA026638
I
ACYPI006194
Acyrthosiphon pisum
ACYPI006194
I
ADIR005630
Anopheles dirus
ADIR005630
I
ADIR005633
Anopheles dirus
ADIR005633
I
ADIR009659
Anopheles dirus
ADIR009659
I
AEPI003628
Anopheles epiroticus
AEPI003628
I
AEPI007651
Anopheles epiroticus
AEPI007651
N
AEPI007946
Anopheles epiroticus
AEPI007946
N
AEPI010515
Anopheles epiroticus
AEPI010515
I
AFAF017335
Anopheles farauti
AFAF017335
I
AFUN009319
Anopheles funestus
AFUN009319
I
AFUN010196
Anopheles funestus
AFUN010196
I
AFUN010199
Anopheles funestus
AFUN010199
I
AGAP010923
Anopheles gambiae
AGAP010923
I
AGAP012033
Anopheles gambiae
AGAP012033
I
AMAM006332
Anopheles maculatus
AMAM006332
I
AMAM015893
Anopheles maculatus
AMAM015893
I
AMAM018985
Anopheles maculatus
AMAM018985
I
AMAM022760
Anopheles maculatus
AMAM022760
N
AMEC008804
Anopheles melas
AMEC008804
I
AMEC012053
Anopheles melas
AMEC012053
I
AMEC014560
Anopheles melas
AMEC014560
I
AMEC016085
Anopheles melas
AMEC016085
I
AMEM010579
Anopheles merus
AMEM010579
I
AMEM014190
Anopheles merus
AMEM014190
I
AMIN001219
Anopheles minimus
AMIN001219
I
AMIN008219
Anopheles minimus
AMIN008219
I
AMIN009301
Anopheles minimus
AMIN009301
I
AMIN009304
Anopheles minimus
AMIN009304
I
ANCCAN_22368
Ancylostoma caninum
ANCCAN_22368
N
ANCDUO_17471
Ancylostoma duodenale
ANCDUO_17471
I
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
AQUA001259
Anopheles quadriannulatus
AQUA001259
I
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
AQUA004309
Anopheles quadriannulatus
AQUA004309
I
ASIS016076
Anopheles sinensis
ASIS016076
N
ASTEI06129
Anopheles stephensi
ASTEI06129
N
ASTEI06407
Anopheles stephensi
ASTEI06407
I
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
BBX
Homo sapiens
ENSG00000114439
D
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
BGIBMGA004367
Bombyx mori
BGIBMGA004367
I
BGLB002734
Biomphalaria glabrata
BGLB002734
I
BGLB010904
Biomphalaria glabrata
BGLB010904
I
CapteG70604
Capitella teleta
CapteG70604
I
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
CGI_10003991
Crassostrea gigas
CGI_10003991
I
CGOC_0001130501
Cylicostephanus goldi
CGOC_0001130501
I
CLEC006959
Cimex lectularius
CLEC006959
I
CLEC006961
Cimex lectularius
CLEC006961
I
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
CPIJ014016
Culex quinquefasciatus
CPIJ014016
N
CPIJ014424
Culex quinquefasciatus
CPIJ014424
I
CPIJ017659
Culex quinquefasciatus
CPIJ017659
I
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
CpipJ_CPIJ014016
Culex pipiens
CpipJ_CPIJ014016
N
CpipJ_CPIJ014424
Culex pipiens
CpipJ_CPIJ014424
I
CpipJ_CPIJ017659
Culex pipiens
CpipJ_CPIJ017659
I
CY34DRAFT_106474
Suillus luteus
CY34DRAFT_106474
N
D918_08316
Trichuris suis
D918_08316
N
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
DAPPUDRAFT_35405
Daphnia pulex
DAPPUDRAFT_35405
I
ENSAMEG00000016773
Ailuropoda melanoleuca
ENSAMEG00000016773
I
ENSAMXG00000007582
Astyanax mexicanus
ENSAMXG00000007582
I
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
ENSCSAVG00000000494
Ciona savignyi
ENSCSAVG00000000494
I
ENSDNOG00000034433
Dasypus novemcinctus
ENSDNOG00000034433
N
ENSDORG00000001450
Dipodomys ordii
ENSDORG00000001450
I
ENSDORG00000003967
Dipodomys ordii
ENSDORG00000003967
I
ENSDORG00000012440
Dipodomys ordii
ENSDORG00000012440
I
ENSFALG00000002572
Ficedula albicollis
ENSFALG00000002572
I
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
ENSMEUG00000014457
Macropus eugenii
ENSMEUG00000014457
I
ENSMEUG00000015665
Macropus eugenii
ENSMEUG00000015665
I
ENSNLEG00000009528
Nomascus leucogenys
ENSNLEG00000009528
I
ENSNLEG00000010228
Nomascus leucogenys
ENSNLEG00000010228
I
ENSOARG00000009998
Ovis aries
ENSOARG00000009998
I
ENSPMAG00000010371
Petromyzon marinus
ENSPMAG00000010371
I
ENSPSIG00000009504
Pelodiscus sinensis
ENSPSIG00000009504
I
ENSPTRG00000005969
Pan troglodytes
ENSPTRG00000005969
I
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
ENSTTRG00000005878
Tursiops truncatus
ENSTTRG00000005878
I
ENSVPAG00000000908
Vicugna pacos
ENSVPAG00000000908
I
GA21052
Drosophila pseudoobscura
FBgn0081040
I
GB40960
Apis mellifera
GB40960
I
GE12330
Drosophila yakuba
FBgn0230081
I
genemark-nMf.1.1.scaf16788-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf16788-processed-gene-0.1
I
GF12898
Drosophila ananassae
FBgn0089932
I
Gfo_R009506
Geospiza fortis
Gfo_R009506
I
GG22439
Drosophila erecta
FBgn0114611
I
GH20045
Drosophila grimshawi
FBgn0127509
I
GI20453
Drosophila mojavensis
FBgn0143189
I
GJ22304
Drosophila virilis
FBgn0209417
I
GK21748
Drosophila willistoni
FBgn0223733
I
GL17288
Drosophila persimilis
FBgn0154891
I
GLOINDRAFT_28614
Rhizophagus irregularis
GLOINDRAFT_28614
N
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
GLYMA01G28253
Glycine max
GLYMA01G28253
N
GM20225
Drosophila sechellia
FBgn0175108
I
GRMZM2G144398
Zea mays
GRMZM2G144398
N
GRMZM2G150348
Zea mays
GRMZM2G150348
N
HBP1
Homo sapiens
ENSG00000105856
D
HelroG148277
Helobdella robusta
HelroG148277
N
HMEL016850
Heliconius melpomene
HMEL016850
I
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
Hsal_04828--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04828--XP_001122993.1_APIME
I
ISCW009925
Ixodes scapularis
ISCW009925
I
KGM_05609
Danaus plexippus
KGM_05609
N
L798_02392
Zootermopsis nevadensis
L798_02392
I
L798_04020
Zootermopsis nevadensis
L798_04020
N
L798_09360
Zootermopsis nevadensis
L798_09360
N
L798_12045
Zootermopsis nevadensis
L798_12045
I
L898_g3197
Steinernema monticolum
L898_g3197
I
LCUP001585
Lucilia cuprina
LCUP001585
I
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
LotgiG120517
Lottia gigantea
LotgiG120517
I
LotgiG88815
Lottia gigantea
LotgiG88815
I
M404DRAFT_79773
Pisolithus tinctorius
M404DRAFT_79773
N
MCINX002905
Melitaea cinxia
MCINX002905
I
MCINX011114
Melitaea cinxia
MCINX011114
I
MDOA011444
Musca domestica
MDOA011444
I
MESCA000459
Megaselia scalaris
MESCA000459
I
MESCA009852
Megaselia scalaris
MESCA009852
I
ML23337a
Mnemiopsis leidyi
ML23337a
N
MPER_07337
Moniliophthora perniciosa
MPER_07337
N
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
nDi.2.2.2.g10379
Dirofilaria immitis
nDi.2.2.2.g10379
I
NECAME_14932
Necator americanus
NECAME_14932
N
NEMVEDRAFT_v1g163545
Nematostella vectensis
NEMVEDRAFT_v1g163545
I
nLs.2.1.2.g10155
Litomosoides sigmodontis
nLs.2.1.2.g10155
I
NV15963
Nasonia vitripennis
NV15963
I
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
OESDEN_18796
Oesophagostomum dentatum
OESDEN_18796
N
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
PEQ_0000771101
Parascaris equorum
PEQ_0000771101
I
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
PHUM433270
Pediculus humanus
PHUM433270
N
PPAI008595
Phlebotomus papatasi
PPAI008595
N
PPAI009257
Phlebotomus papatasi
PPAI009257
N
PXEA_0001829801
Protopolystoma xenopodis
PXEA_0001829801
N
RPRC012125
Rhodnius prolixus
RPRC012125
N
RPRC012780
Rhodnius prolixus
RPRC012780
I
RPRC014334
Rhodnius prolixus
RPRC014334
I
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
SINV16626
Solenopsis invicta
SINV16626
I
SINV19744
Solenopsis invicta
SINV19744
I
SINV19753
Solenopsis invicta
SINV19753
I
SMAR010127
Strigamia maritima
SMAR010127
N
SOX1
Anolis carolinensis
ENSACAG00000006346
I
SOX10
Erinaceus europaeus
ENSEEUG00000011263
I
SOX10
Meleagris gallopavo
ENSMGAG00000012508
I
SOX10
Ochotona princeps
ENSOPRG00000013575
I
SOX10
Procavia capensis
ENSPCAG00000005913
I
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
SOX12
Sus scrofa
ENSSSCG00000021920
I
SOX13
Felis catus
ENSFCAG00000002900
I
SOX13
Microcebus murinus
ENSMICG00000009236
I
Sox15
Drosophila melanogaster
FBgn0005613
D
SOX17
Procavia capensis
ENSPCAG00000003188
I
SOX3
Pteropus vampyrus
ENSPVAG00000003166
I
SOX30
Procavia capensis
ENSPCAG00000010619
N
SOX5
Sorex araneus
ENSSARG00000007963
I
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
SOX6
Echinops telfairi
ENSETEG00000001898
I
SOX6
Procavia capensis
ENSPCAG00000001398
N
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
SOX9
Pteropus vampyrus
ENSPVAG00000010505
I
sox9b
Danio rerio
ENSDARG00000043923
I
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
SPU_021407
Strongylocentrotus purpuratus
SPU_021407
N
TC003791
Tribolium castaneum
TC003791
I
TC009854
Tribolium castaneum
TC009854
I
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
tetur03g05800
Tetranychus urticae
tetur03g05800
I
WUBG_09252
Wuchereria bancrofti
WUBG_09252
I
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
XP_002935939
Xenopus tropicalis
XP_002935939
I
YQE_08560
Dendroctonus ponderosae
YQE_08560
I