XP_002933405 (Xenopus tropicalis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 XP_002933405 T174093_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.971 0.971
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.971 0.971
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.765 0.765
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002933405 E2F 581 661

Links

Other E2F family TFs
Other Xenopus tropicalis TFs

522 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28353.m000054 Ricinus communis 28353.m000054 I
29912.m005463 Ricinus communis 29912.m005463 I
30146.m003535 Ricinus communis 30146.m003535 I
30174.m008790 Ricinus communis 30174.m008790 I
AC187157.4_FG001 Zea mays AC187157.4_FG001 I
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I
ERF037 Arabidopsis thaliana AT1G77200 D
ERF038 Arabidopsis thaliana AT2G35700 D
ERF034 Arabidopsis thaliana AT2G44940 D
ERF035 Arabidopsis thaliana AT3G60490 D
ERF039 Arabidopsis thaliana AT4G16750 D
ERF043 Arabidopsis thaliana AT4G32800 D
BGIOSGA002184 Oryza indica BGIOSGA002184 I
BGIOSGA016883 Oryza indica BGIOSGA016883 I
BGIOSGA016884 Oryza indica BGIOSGA016884 I
Bo1g009990 Brassica oleracea Bo1g009990 I
Bo1g053270 Brassica oleracea Bo1g053270 I
Bo3g037480 Brassica oleracea Bo3g037480 I
Bo3g171090 Brassica oleracea Bo3g171090 I
Bo4g024220 Brassica oleracea Bo4g024220 I
Bo4g036220 Brassica oleracea Bo4g036220 I
Bo4g195280 Brassica oleracea Bo4g195280 I
Bo6g083410 Brassica oleracea Bo6g083410 I
Bo6g121150 Brassica oleracea Bo6g121150 I
Bo7g104770 Brassica oleracea Bo7g104770 I
Bo7g115860 Brassica oleracea Bo7g115860 I
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I
Bostr.20129s0154 Boechera stricta Bostr.20129s0154 I
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I
Bostr.30275s0134 Boechera stricta Bostr.30275s0134 I
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I
Bra000366 Brassica rapa Bra000366 I
Bra004878 Brassica rapa Bra004878 I
Bra005314 Brassica rapa Bra005314 I
Bra011383 Brassica rapa Bra011383 I
Bra012693 Brassica rapa Bra012693 I
Bra015686 Brassica rapa Bra015686 I
Bra034535 Brassica rapa Bra034535 I
Bra037041 Brassica rapa Bra037041 I
Bra040092 Brassica rapa Bra040092 I
Bra040333 Brassica rapa Bra040333 I
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I
BRADI5G17620 Brachypodium distachyon BRADI5G17620 I
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I
Carubv10005867m.g Capsella rubella Carubv10005867m.g I
Carubv10006567m.g Capsella rubella Carubv10006567m.g I
Carubv10017799m.g Capsella rubella Carubv10017799m.g I
Carubv10022336m.g Capsella rubella Carubv10022336m.g I
Carubv10023699m.g Capsella rubella Carubv10023699m.g I
Carubv10024111m.g Capsella rubella Carubv10024111m.g I
cassava10514.m1 Manihot esculenta cassava10514.m1 I
cassava11373.m1 Manihot esculenta cassava11373.m1 I
cassava15622.m1 Manihot esculenta cassava15622.m1 I
cassava17387.m1 Manihot esculenta cassava17387.m1 I
cassava19875.m1 Manihot esculenta cassava19875.m1 I
cassava19912.m1 Manihot esculenta cassava19912.m1 I
Ca_05941 Cicer arietinum Ca_05941 I
Ca_12765 Cicer arietinum Ca_12765 I
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I
chr1.CM0206.1000.nd Lotus japonicus chr1.CM0206.1000.nd I
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I
Cla004187 Citrullus lanatus Cla004187 I
Cla017050 Citrullus lanatus Cla017050 I
Cla023465 Citrullus lanatus Cla023465 I
Cucsa.116550 Cucumis sativus Cucsa.116550 I
Cucsa.121080 Cucumis sativus Cucsa.121080 I
Cucsa.235510 Cucumis sativus Cucsa.235510 I
Cucsa.312570 Cucumis sativus Cucsa.312570 I
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I
F775_04501 Aegilops tauschii F775_04501 I
F775_11989 Aegilops tauschii F775_11989 I
F775_14820 Aegilops tauschii F775_14820 I
fgenesh2_kg.2__2014__AT1G77200.1 Arabidopsis lyrata fgenesh2_kg.2__2014__AT1G77200.1 I
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I
fgenesh2_kg.7__2633__AT4G16750.1 Arabidopsis lyrata fgenesh2_kg.7__2633__AT4G16750.1 I
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I
GLYMA01G13410 Glycine max GLYMA01G13410 I
GLYMA03G27050 Glycine max GLYMA03G27050 I
GLYMA05G35741 Glycine max GLYMA05G35741 I
GLYMA07G14560 Glycine max GLYMA07G14560 I
GLYMA08G03910 Glycine max GLYMA08G03910 I
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I
Gorai.001G176500 Gossypium raimondii Gorai.001G176500 I
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I
Gorai.007G028800 Gossypium raimondii Gorai.007G028800 I
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I
GRMZM2G005301 Zea mays GRMZM2G005301 I
GRMZM2G041839 Zea mays GRMZM2G041839 I
GRMZM2G047918 Zea mays GRMZM2G047918 I
GRMZM2G048621 Zea mays GRMZM2G048621 I
GRMZM2G072926 Zea mays GRMZM2G072926 I
GRMZM2G073047 Zea mays GRMZM2G073047 I
GRMZM2G172936 Zea mays GRMZM2G172936 I
GRMZM5G806839 Zea mays GRMZM5G806839 I
GRMZM5G816314 Zea mays GRMZM5G816314 I
GRMZM5G842961 Zea mays GRMZM5G842961 I
GRMZM5G889719 Zea mays GRMZM5G889719 I
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I
GSMUA_Achr6G26280_001 Musa acuminata GSMUA_Achr6G26280_001 I
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I
LjSGA_095655.1 Lotus japonicus LjSGA_095655.1 I
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I
LPERR02G21590 Leersia perrieri LPERR02G21590 I
LPERR04G16900 Leersia perrieri LPERR04G16900 I
LPERR06G15020 Leersia perrieri LPERR06G15020 I
LPERR10G14320 Leersia perrieri LPERR10G14320 I
Lus10001601.g Linum usitatissimum Lus10001601.g I
Lus10002801.g Linum usitatissimum Lus10002801.g I
Lus10038607.g Linum usitatissimum Lus10038607.g I
MDP0000652413 Malus domestica MDP0000652413 I
mgf019024m Mimulus guttatus mgf019024m I
mgf022802m Mimulus guttatus mgf022802m I
mgf022971m Mimulus guttatus mgf022971m I
mgf024816m Mimulus guttatus mgf024816m I
MLOC_17203 Hordeum vulgare MLOC_17203 I
MLOC_3095 Hordeum vulgare MLOC_3095 I
MTR_5g012910 Medicago truncatula MTR_5g012910 I
MTR_7g046260 Medicago truncatula MTR_7g046260 I
MTR_8g102800 Medicago truncatula MTR_8g102800 I
OB01G16440 Oryza brachyantha OB01G16440 I
OB04G27840 Oryza brachyantha OB04G27840 I
OB06G25840 Oryza brachyantha OB06G25840 I
OBART01G06440 Oryza barthii OBART01G06440 I
OBART02G09680 Oryza barthii OBART02G09680 I
OBART04G20820 Oryza barthii OBART04G20820 I
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I
OGLUM06G19330 Oryza glumaepatula OGLUM06G19330 N
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I
OMERI01G06530 Oryza meridionalis OMERI01G06530 I
OMERI02G10950 Oryza meridionalis OMERI02G10950 I
OMERI02G25910 Oryza meridionalis OMERI02G25910 I
OMERI04G17270 Oryza meridionalis OMERI04G17270 I
OMERI04G17290 Oryza meridionalis OMERI04G17290 I
OMERI06G18780 Oryza meridionalis OMERI06G18780 I
OMERI08G00520 Oryza meridionalis OMERI08G00520 I
ONIVA01G08000 Oryza nivara ONIVA01G08000 I
ONIVA02G10590 Oryza nivara ONIVA02G10590 I
ONIVA02G28990 Oryza nivara ONIVA02G28990 I
ONIVA04G19060 Oryza nivara ONIVA04G19060 I
ONIVA04G19090 Oryza nivara ONIVA04G19090 I
ONIVA06G21640 Oryza nivara ONIVA06G21640 I
ONIVA10G21000 Oryza nivara ONIVA10G21000 I
OPUNC01G06210 Oryza punctata OPUNC01G06210 I
OPUNC02G08670 Oryza punctata OPUNC02G08670 I
OPUNC02G24230 Oryza punctata OPUNC02G24230 I
OPUNC04G18520 Oryza punctata OPUNC04G18520 I
OPUNC04G18530 Oryza punctata OPUNC04G18530 I
OPUNC06G16400 Oryza punctata OPUNC06G16400 I
OPUNC10G16830 Oryza punctata OPUNC10G16830 I
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I
OS01G0200600 Oryza sativa OS01G0200600 I
OS02G0657000 Oryza sativa OS02G0657000 I
OS04G0549800 Oryza sativa OS04G0549800 I
OS04G0550200 Oryza sativa OS04G0550200 I
Pavir.Aa00832 Panicum virgatum Pavir.Aa00832 I
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I
Pavir.Ab02601 Panicum virgatum Pavir.Ab02601 I
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I
Pavir.Gb01129 Panicum virgatum Pavir.Gb01129 I
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I
PK01156.1 Cannabis sativa PK01156.1 I
PK29340.1 Cannabis sativa PK29340.1 I
Pm013463 Prunus mume Pm013463 I
Pm017610 Prunus mume Pm017610 I
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I
POPTR_0006s17670 Populus trichocarpa POPTR_0006s17670 I
POPTR_0018s09270 Populus trichocarpa POPTR_0018s09270 I
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I
PRUPE_ppa011735mg Prunus persica PRUPE_ppa011735mg I
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I
SapurV1A.0540s0020 Salix purpurea SapurV1A.0540s0020 I
Sb01g029065 Sorghum bicolor Sb01g029065 I
Sb03g002630 Sorghum bicolor Sb03g002630 I
Sb04g032940 Sorghum bicolor Sb04g032940 I
Sb04g032960 Sorghum bicolor Sb04g032960 I
Sb06g024540 Sorghum bicolor Sb06g024540 I
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I
Si002749m.g Setaria italica Si002749m.g I
Si007144m.g Setaria italica Si007144m.g I
Si012254m.g Setaria italica Si012254m.g I
Si012688m.g Setaria italica Si012688m.g I
Si017865m.g Setaria italica Si017865m.g I
Si017995m.g Setaria italica Si017995m.g I
Si018188m.g Setaria italica Si018188m.g I
Si018222m.g Setaria italica Si018222m.g I
Si019772m.g Setaria italica Si019772m.g I
Si039427m.g Setaria italica Si039427m.g I
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I
TCM_005639 Theobroma cacao TCM_005639 I
TCM_014892 Theobroma cacao TCM_014892 I
TCM_015930 Theobroma cacao TCM_015930 I
TCM_028851 Theobroma cacao TCM_028851 I
TCM_037811 Theobroma cacao TCM_037811 I
TCM_044478 Theobroma cacao TCM_044478 I
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I
Thhalv10019064m.g Eutrema salsugineum Thhalv10019064m.g I
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I
Thhalv10026276m.g Eutrema salsugineum Thhalv10026276m.g I
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I
Traes_2AL_0F08552FB Triticum aestivum Traes_2AL_0F08552FB I
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I
Traes_2BL_984787AC0 Triticum aestivum Traes_2BL_984787AC0 I
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I
VIT_11s0016g03350 Vitis vinifera VIT_11s0016g03350 I
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I