CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000614601
(
Angiostrongylus costaricensis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
ACOC_0000614601
T174198_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.750
0.750
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.694
0.694
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.694
0.694
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000614601-mRNA-1
E2F
3
42
SEEQKYDQKNIRRRVYDALNVLLAMNIICKRKKVRYRLGW
Links
Other
E2F
family TFs
Other
Angiostrongylus costaricensis
TFs
252 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000120701
Angiostrongylus cantonensis
ACAC_0000120701
I
0.833
HPBE_0000908201
Heligmosomoides bakeri
HPBE_0000908201
I
0.806
NECAME_05547
Necator americanus
NECAME_05547
I
0.806
OESDEN_02583
Oesophagostomum dentatum
OESDEN_02583
I
0.806
CBN26337
Caenorhabditis brenneri
CBN26337
I
0.750
CJA13523
Caenorhabditis japonica
CJA13523
I
0.750
CRE22580
Caenorhabditis remanei
CRE22580
I
0.750
ENSAMXG00000010221
Astyanax mexicanus
ENSAMXG00000010221
I
0.750
tfdp2
Danio rerio
ENSDARG00000042835
I
0.750
GB55012
Apis mellifera
GB55012
I
0.750
ISCW016614
Ixodes scapularis
ISCW016614
I
0.750
NV12488
Nasonia vitripennis
NV12488
I
0.750
SINV16192
Solenopsis invicta
SINV16192
I
0.750
dpl-1
Caenorhabditis elegans
WBGene00001061
D
0.750
Cflo_08175--XP_393377.3_APIME
Camponotus floridanus
Cflo_08175--XP_393377.3_APIME
I
0.750
Hsal_11625--XP_393377.3_APIME
Harpegnathos saltator
Hsal_11625--XP_393377.3_APIME
I
0.750
HHAL010618-PA
Halyomorpha halys
HHAL010618-PA
I
0.750
ACEP27894
Atta cephalotes
ACEP27894
I
0.722
CGI_10012373
Crassostrea gigas
CGI_10012373
I
0.722
ENSACAG00000000428
Anolis carolinensis
ENSACAG00000000428
I
0.722
TFDP2
Bos taurus
ENSBTAG00000006222
I
0.722
TFDP2
Canis familiaris
ENSCAFG00000007742
I
0.722
TFDP2
Choloepus hoffmanni
ENSCHOG00000010774
I
0.722
TFDP2
Callithrix jacchus
ENSCJAG00000001950
I
0.722
ENSFALG00000003322
Ficedula albicollis
ENSFALG00000003322
I
0.722
TFDP2
Homo sapiens
ENSG00000114126
I
0.722
ENSLACG00000006246
Latimeria chalumnae
ENSLACG00000006246
I
0.722
ENSMEUG00000008570
Macropus eugenii
ENSMEUG00000008570
I
0.722
TFDP2
Myotis lucifugus
ENSMLUG00000014707
I
0.722
TFDP2
Macaca mulatta
ENSMMUG00000011134
I
0.722
TFDP2
Monodelphis domestica
ENSMODG00000021234
I
0.722
ENSMPUG00000012159
Mustela putorius furo
ENSMPUG00000012159
I
0.722
Tfdp2
Mus musculus
ENSMUSG00000032411
I
0.722
ENSOARG00000006450
Ovis aries
ENSOARG00000006450
I
0.722
TFDP2
Otolemur garnettii
ENSOGAG00000000168
I
0.722
TFDP2
Procavia capensis
ENSPCAG00000012988
I
0.722
ENSPSIG00000007116
Pelodiscus sinensis
ENSPSIG00000007116
I
0.722
TFDP2
Pan troglodytes
ENSPTRG00000015479
I
0.722
TFDP2
Pteropus vampyrus
ENSPVAG00000003327
I
0.722
ENSSTOG00000013241
Ictidomys tridecemlineatus
ENSSTOG00000013241
I
0.722
ENSTSYG00000009267
Tarsius syrichta
ENSTSYG00000009267
I
0.722
TFDP2
Tursiops truncatus
ENSTTRG00000012044
I
0.722
TFDP2
Vicugna pacos
ENSVPAG00000004687
I
0.722
LotgiG114027
Lottia gigantea
LotgiG114027
I
0.722
PPA23794
Pristionchus pacificus
PPA23794
I
0.722
SMAR015689
Strigamia maritima
SMAR015689
I
0.722
TC010400
Tribolium castaneum
TC010400
I
0.722
YQE_01725
Dendroctonus ponderosae
YQE_01725
I
0.722
Myotis_brandtii_TFDP2_10028256
Myotis brandtii
Myotis_brandtii_TFDP2_10028256
I
0.722
L596_g13880
Steinernema carpocapsae
L596_g13880
I
0.722
L889_g20641
Steinernema feltiae
L889_g20641
I
0.722
L892_g8655
Steinernema scapterisci
L892_g8655
I
0.722
L893_g10155
Steinernema glaseri
L893_g10155
I
0.722
RO3G_15647
Rhizopus oryzae
RO3G_15647
I
0.694
AGAP012461
Anopheles gambiae
AGAP012461
I
0.694
Bo2g004050
Brassica oleracea
Bo2g004050
I
0.694
DAPPUDRAFT_59524
Daphnia pulex
DAPPUDRAFT_59524
I
0.694
ENSAMEG00000004645
Ailuropoda melanoleuca
ENSAMEG00000004645
I
0.694
ENSAMEG00000012466
Ailuropoda melanoleuca
ENSAMEG00000012466
I
0.694
ENSAMXG00000002648
Astyanax mexicanus
ENSAMXG00000002648
I
0.694
ENSAPLG00000014438
Anas platyrhynchos
ENSAPLG00000014438
I
0.694
TFDP1
Bos taurus
ENSBTAG00000019645
I
0.694
TFDP1
Canis familiaris
ENSCAFG00000006384
I
0.694
ENSCHOG00000004467
Choloepus hoffmanni
ENSCHOG00000004467
I
0.694
TFDP2
Cavia porcellus
ENSCPOG00000013203
I
0.694
TFDP1
Cavia porcellus
ENSCPOG00000013486
I
0.694
ENSCSAG00000011244
Chlorocebus sabaeus
ENSCSAG00000011244
I
0.694
ENSCSAG00000017427
Chlorocebus sabaeus
ENSCSAG00000017427
I
0.694
tfdp1a
Danio rerio
ENSDARG00000019293
I
0.694
TFDP2
Dasypus novemcinctus
ENSDNOG00000016968
I
0.694
TFDP1
Dasypus novemcinctus
ENSDNOG00000049735
I
0.694
Tfdp1
Dipodomys ordii
ENSDORG00000001657
I
0.694
TFDP1
Equus caballus
ENSECAG00000013054
I
0.694
TFDP2
Equus caballus
ENSECAG00000021725
I
0.694
TFDP1
Felis catus
ENSFCAG00000005399
I
0.694
TFDP1
Homo sapiens
ENSG00000198176
D
0.694
ENSGALG00000016823
Gallus gallus
ENSGALG00000016823
I
0.694
TFDP1
Gorilla gorilla
ENSGGOG00000004908
I
0.694
TFDP2
Gorilla gorilla
ENSGGOG00000007878
I
0.694
TFDP1
Loxodonta africana
ENSLAFG00000007927
I
0.694
TFDP2
Loxodonta africana
ENSLAFG00000010557
I
0.694
ENSMEUG00000003211
Macropus eugenii
ENSMEUG00000003211
I
0.694
ENSMGAG00000014844
Meleagris gallopavo
ENSMGAG00000014844
I
0.694
TFDP1
Myotis lucifugus
ENSMLUG00000012165
I
0.694
TFDP1
Macaca mulatta
ENSMMUG00000007423
I
0.694
ENSMODG00000003737
Monodelphis domestica
ENSMODG00000003737
I
0.694
ENSMPUG00000009700
Mustela putorius furo
ENSMPUG00000009700
I
0.694
Tfdp1
Mus musculus
ENSMUSG00000038482
I
0.694
ENSNLEG00000004672
Nomascus leucogenys
ENSNLEG00000004672
I
0.694
TFDP2
Ornithorhynchus anatinus
ENSOANG00000000434
I
0.694
ENSOANG00000015627
Ornithorhynchus anatinus
ENSOANG00000015627
I
0.694
TFDP1
Otolemur garnettii
ENSOGAG00000003532
I
0.694
ENSPANG00000007195
Papio anubis
ENSPANG00000007195
I
0.694
ENSPCAG00000000694
Procavia capensis
ENSPCAG00000000694
I
0.694
ENSPPYG00000014170
Pongo abelii
ENSPPYG00000014170
I
0.694
ENSPPYG00000025889
Pongo abelii
ENSPPYG00000025889
I
0.694
ENSPSIG00000007519
Pelodiscus sinensis
ENSPSIG00000007519
I
0.694
TFDP1
Pteropus vampyrus
ENSPVAG00000013413
I
0.694
Tfdp2
Rattus norvegicus
ENSRNOG00000011241
I
0.694
Tfdp1
Rattus norvegicus
ENSRNOG00000019222
I
0.694
ENSSHAG00000015145
Sarcophilus harrisii
ENSSHAG00000015145
I
0.694
ENSSHAG00000016738
Sarcophilus harrisii
ENSSHAG00000016738
I
0.694
TFDP1
Sus scrofa
ENSSSCG00000009560
I
0.694
ENSSSCG00000026809
Sus scrofa
ENSSSCG00000026809
I
0.694
ENSSTOG00000002592
Ictidomys tridecemlineatus
ENSSTOG00000002592
I
0.694
ENSTGUG00000009272
Taeniopygia guttata
ENSTGUG00000009272
I
0.694
Aan_R015136
Calypte anna
Aan_R015136
I
0.694
Afo_R015892
Aptenodytes forsteri
Afo_R015892
I
0.694
Alligator_sinensis_CCG009925.1
Alligator sinensis
Alligator_sinensis_CCG009925.1
I
0.694
Brh_R012869
Buceros rhinoceros
Brh_R012869
I
0.694
Cmyd_10020356
Chelonia mydas
Cmyd_10020356
I
0.694
ENSP00000364519-D1
Bos grunniens
ENSP00000364519-D1
I
0.694
ENSP00000364519
Macaca fascicularis
ENSP00000364519
I
0.694
ENSP00000420616-D1
Bos grunniens
ENSP00000420616-D1
I
0.694
ENSP00000420616
Macaca fascicularis
ENSP00000420616
I
0.694
Gfo_R005557
Geospiza fortis
Gfo_R005557
I
0.694
Myotis_brandtii_TFDP1_10005235
Myotis brandtii
Myotis_brandtii_TFDP1_10005235
I
0.694
Pvit_02579
Pogona vitticeps
Pvit_02579
I
0.694
AARA010199
Anopheles arabiensis
AARA010199
I
0.694
ACHR004804
Anopheles christyi
ACHR004804
I
0.694
ACOM037695
Anopheles coluzzii
ACOM037695
I
0.694
ADIR009450
Anopheles dirus
ADIR009450
I
0.694
AEPI008634
Anopheles epiroticus
AEPI008634
I
0.694
AFAF000065
Anopheles farauti
AFAF000065
I
0.694
AMEC001227
Anopheles melas
AMEC001227
I
0.694
AMEM000167
Anopheles merus
AMEM000167
I
0.694
AQUA006353
Anopheles quadriannulatus
AQUA006353
I
0.694
Ogr00419
Ophisaurus gracilis
Ogr00419
I
0.676
ALNC14_015160
Albugo laibachii
ALNC14_015160
I
0.667
DPB
Arabidopsis thaliana
AT5G03415
I
0.667
BRADI3G27520
Brachypodium distachyon
BRADI3G27520
I
0.667
ENSAMXG00000016202
Astyanax mexicanus
ENSAMXG00000016202
I
0.667
F775_24235
Aegilops tauschii
F775_24235
I
0.667
DPB
Arabidopsis lyrata
fgenesh2_kg.6__250__AT5G03415.1
I
0.667
GRMZM2G139024
Zea mays
GRMZM2G139024
I
0.667
LPERR03G03690
Leersia perrieri
LPERR03G03690
I
0.667
ML07764a
Mnemiopsis leidyi
ML07764a
I
0.667
OGLUM03G03940
Oryza glumaepatula
OGLUM03G03940
I
0.667
OMERI03G03840
Oryza meridionalis
OMERI03G03840
I
0.667
ONIVA03G03810
Oryza nivara
ONIVA03G03810
I
0.667
ORUFI03G03750
Oryza rufipogon
ORUFI03G03750
I
0.667
Sb01g021000
Sorghum bicolor
Sb01g021000
I
0.667
Si036476m.g
Setaria italica
Si036476m.g
I
0.667
tetur36g00480
Tetranychus urticae
tetur36g00480
I
0.667
tetur36g00490
Tetranychus urticae
tetur36g00490
I
0.667
Traes_1BL_6F280C355
Triticum aestivum
Traes_1BL_6F280C355
I
0.667
Traes_1DL_7FAB00DBB
Triticum aestivum
Traes_1DL_7FAB00DBB
I
0.667
Pvit_13706
Pogona vitticeps
Pvit_13706
I
0.667
Bostr.2128s0112
Boechera stricta
Bostr.2128s0112
I
0.667
Cagra.4354s0002
Capsella grandiflora
Cagra.4354s0002
I
0.667
Carubv10001164m.g
Capsella rubella
Carubv10001164m.g
I
0.667
evm.TU.supercontig_738.1
Carica papaya
evm.TU.supercontig_738.1
I
0.667
fgenesh2_pg.C_Chr_02000142
Micromonas sp RCC299
fgenesh2_pg.C_Chr_02000142
I
0.667
Pavir.Ia01865
Panicum virgatum
Pavir.Ia01865
I
0.667
Pavir.Ib03342
Panicum virgatum
Pavir.Ib03342
I
0.667
Thhalv10014118m.g
Eutrema salsugineum
Thhalv10014118m.g
I
0.667
XP_002169779.1
Hydra magnipapillata
XP_002169779.1
I
0.667
PTRK_0000381000
Parastrongyloides trichosuri
PTRK_0000381000
I
0.667
SPAL_0000874700
Strongyloides papillosus
SPAL_0000874700
I
0.667
SSTP_0000696800
Strongyloides stercoralis
SSTP_0000696800
I
0.667
SVE_0730800
Strongyloides venezuelensis
SVE_0730800
I
0.667
DME_0000497501
Dracunculus medinensis
DME_0000497501
I
0.657
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0
I
0.649
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0
I
0.649
Bm5962
Brugia malayi
Bm5962
I
0.639
GH20730
Drosophila grimshawi
FBgn0128193
I
0.639
GI20813
Drosophila mojavensis
FBgn0143548
I
0.639
GJ20546
Drosophila virilis
FBgn0207686
I
0.639
LPERR10G08170
Leersia perrieri
LPERR10G08170
I
0.639
maker-pve_contig_507-snap-gene-0.12
Pythium vexans
maker-pve_contig_507-snap-gene-0.12
I
0.639
PGSC0003DMG400008373
Solanum tuberosum
PGSC0003DMG400008373
I
0.639
POPTR_0006s12620
Populus trichocarpa
POPTR_0006s12620
I
0.639
POPTR_0016s09640
Populus trichocarpa
POPTR_0016s09640
I
0.639
Solyc10g078430.1
Solanum lycopersicum
Solyc10g078430.1
I
0.639
30078.m002288
Ricinus communis
30078.m002288
I
0.639
cassava23535.valid.m1
Manihot esculenta
cassava23535.valid.m1
I
0.639
cassava31269.valid.m1
Manihot esculenta
cassava31269.valid.m1
I
0.639
fgeneshHS_pg.scaffold_39000098
Naegleria gruberi
fgeneshHS_pg.scaffold_39000098
I
0.639
estExt_Genemark1.C_10169
Coccomyxa subellipsoidea C169
estExt_Genemark1.C_10169
I
0.639
MDP0000316055
Malus domestica
MDP0000316055
I
0.639
SapurV1A.0584s0010
Salix purpurea
SapurV1A.0584s0010
I
0.639
estExt_fgeneshCV_pg.C_10474
Chlorella vulgaris
estExt_fgeneshCV_pg.C_10474
I
0.639
MDOA008269
Musca domestica
MDOA008269
I
0.639
L892_g29039
Steinernema scapterisci
L892_g29039
I
0.639
OFLC_0001069401
Onchocerca flexuosa
OFLC_0001069401
I
0.639
CHLREDRAFT_206363
Chlamydomonas reinhardtii
CHLREDRAFT_206363
I
0.611
ENSPANG00000015732
Papio anubis
ENSPANG00000015732
I
0.611
maker-pir_contig_483-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_483-fgenesh-gene-0.6
I
0.611
estExt_fgenesh1_pg.C_20629
Monosiga brevicollis
estExt_fgenesh1_pg.C_20629
I
0.611
estExt_fgeneshMC_pg.C_21302
Mucor circinelloides
estExt_fgeneshMC_pg.C_21302
I
0.611
SapurV1A.1230s0050
Salix purpurea
SapurV1A.1230s0050
I
0.611
ECANG7_00244
Echinococcus canadensis
ECANG7_00244
I
0.611
EmuJ_000433000
Echinococcus multilocularis
EmuJ_000433000
I
0.611
L596_g13878
Steinernema carpocapsae
L596_g13878
I
0.611
TsM_001035400
Taenia solium
TsM_001035400
I
0.611
TTAC_0000189901
Hydatigera taeniaeformis
TTAC_0000189901
I
0.611
ENSMMUG00000000533
Macaca mulatta
ENSMMUG00000000533
I
0.583
ENSOGAG00000032340
Otolemur garnettii
ENSOGAG00000032340
I
0.583
Traes_3AL_D7DE23839
Triticum aestivum
Traes_3AL_D7DE23839
I
0.583
TRAES3BF076900030CFD_g
Triticum aestivum
TRAES3BF076900030CFD_g
I
0.583
Traes_3DL_1E9DECCEA
Triticum aestivum
Traes_3DL_1E9DECCEA
I
0.583
fgenesh1_pm.chr_10_#_45
Ostreococcus RCC809
fgenesh1_pm.chr_10_#_45
I
0.583
gw1.2.505.1
Chlorella NC64A
gw1.2.505.1
I
0.583
Aquca_062_00025
Aquilegia coerulea
Aquca_062_00025
I
0.583
Lus10014423.g
Linum usitatissimum
Lus10014423.g
I
0.583
Lus10023926.g
Linum usitatissimum
Lus10023926.g
I
0.583
LjSGA_030786.1
Lotus japonicus
LjSGA_030786.1
I
0.571
PTSG_09983
Salpingoeca rosetta
PTSG_09983
I
0.556
BGIOSGA001024
Oryza indica
BGIOSGA001024
I
0.556
GSMUA_Achr3G16470_001
Musa acuminata
GSMUA_Achr3G16470_001
I
0.556
GUITHDRAFT_133922
Guillardia theta
GUITHDRAFT_133922
I
0.556
OSTLU_38105
Ostreococcus lucimarinus
OSTLU_38105
I
0.556
Si003799m.g
Setaria italica
Si003799m.g
I
0.556
Gorai.007G375800
Gossypium raimondii
Gorai.007G375800
I
0.556
ENSCSAG00000000299
Chlorocebus sabaeus
ENSCSAG00000000299
I
0.528
TFDP3
Macaca mulatta
ENSMMUG00000017335
I
0.528
ENSPANG00000007095
Papio anubis
ENSPANG00000007095
I
0.528
LPERR01G22650
Leersia perrieri
LPERR01G22650
I
0.528
NERG_01104
Nematocida sp
NERG_01104
N
0.528
OB01G35630
Oryza brachyantha
OB01G35630
I
0.528
OBART01G26520
Oryza barthii
OBART01G26520
I
0.528
OGLUM01G30360
Oryza glumaepatula
OGLUM01G30360
I
0.528
OLONG_005289
Oryza longistaminata
OLONG_005289
I
0.528
OMERI01G24150
Oryza meridionalis
OMERI01G24150
I
0.528
OPUNC01G26430
Oryza punctata
OPUNC01G26430
I
0.528
ORGLA01G0217000
Oryza glaberrima
ORGLA01G0217000
I
0.528
ORUFI01G29490
Oryza rufipogon
ORUFI01G29490
I
0.528
OS01G0678700
Oryza sativa
OS01G0678700
I
0.528
DP1
Phaeodactylum tricornutum
Phatr3_J14805
I
0.528
ENSP00000385461
Macaca fascicularis
ENSP00000385461
I
0.528
evm.TU.contig_32800
Carica papaya
evm.TU.contig_32800
I
0.528
AATE019434
Anopheles atroparvus
AATE019434
I
0.513
GSPATT00036475001
Paramecium tetraurelia
GSPATT00036475001
I
0.500
MLOC_79152
Hordeum vulgare
MLOC_79152
I
0.500
PRUPE_ppa021369mg
Prunus persica
PRUPE_ppa021369mg
I
0.500
Traes_4DL_AE039EE10
Triticum aestivum
Traes_4DL_AE039EE10
I
0.500
TTHERM_00107000
Tetrahymena thermophila
TTHERM_00107000
I
0.500
TVAG_077130
Trichomonas vaginalis
TVAG_077130
I
0.500
Pm002727
Prunus mume
Pm002727
I
0.500
Contig13224.0.1.g9
Oxytricha trifallax
Contig13224.0.1.g9
I
0.500
PK10877.1
Cannabis sativa
PK10877.1
I
0.500
SNAPOd2T00000785001
Oikopleura dioica
SNAPOd2T00000785001
I
0.500
CML315C
Cyanidioschyzon merolae
CML315C
I
0.472
CMT601C
Cyanidioschyzon merolae
CMT601C
I
0.472
GSPATT00011459001
Paramecium tetraurelia
GSPATT00011459001
N
0.472
Gorai.002G247000
Gossypium raimondii
Gorai.002G247000
I
0.462
OLONG_008291
Oryza longistaminata
OLONG_008291
I
0.453
GSPATT00006443001
Paramecium tetraurelia
GSPATT00006443001
N
0.444
cgd7_3650
Cryptosporidium parvum
cgd7_3650
N
0.444
Chro.70407
Cryptosporidium hominis
Chro.70407
N
0.444
PDK_20s1399251g001
Phoenix dactylifera
PDK_20s1399251g001
I
0.442
TriadG32839
Trichoplax adhaerens
TriadG32839
I
0.441