CJA00446 (Caenorhabditis japonica)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) CJA00446 T174468_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.722 0.722
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.722 0.722
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA00446 EBF1 1 36

Links

Other EBF1 family TFs
Other Caenorhabditis japonica TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE15310 Caenorhabditis remanei CRE15310 I 0.972
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.875
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.870
CBG07590 Caenorhabditis briggsae CBG07590 I 0.861
DICVIV_13258 Dictyocaulus viviparus DICVIV_13258 I 0.861
NECAME_10162 Necator americanus NECAME_10162 I 0.861
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.861
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I 0.861
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I 0.861
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.833
HCOI01630600 Haemonchus contortus HCOI01630600 I 0.833
HPLM_0000807901 Haemonchus placei HPLM_0000807901 I 0.833
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.833
LOAG_18199 Loa loa LOAG_18199 I 0.806
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.806
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.806
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.806
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.806
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.784
EFV50386 Trichinella spiralis EFV50386 I 0.778
D917_06660 Trichinella nativa D917_06660 I 0.778
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.778
L889_g1820 Steinernema feltiae L889_g1820 I 0.778
L893_g31120 Steinernema glaseri L893_g31120 I 0.778
L898_g8304 Steinernema monticolum L898_g8304 I 0.778
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.750
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.750
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.750
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.750
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.750
GB42304 Apis mellifera GB42304 I 0.750
ISCW021817 Ixodes scapularis ISCW021817 I 0.750
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.750
BXY_1639700 Bursaphelenchus xylophilus BXY_1639700 I 0.750
ACEP22947 Atta cephalotes ACEP22947 I 0.722
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.722
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.722
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.722
EBF2 Bos taurus ENSBTAG00000040390 I 0.722
EBF2 Canis familiaris ENSCAFG00000008918 I 0.722
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.722
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.722
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.722
ebf2 Danio rerio ENSDARG00000042525 I 0.722
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.722
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.722
EBF2 Homo sapiens ENSG00000221818 D 0.722
EBF2 Gallus gallus ENSGALG00000000242 I 0.722
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.722
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.722
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.722
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.722
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.722
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.722
Ebf2 Mus musculus ENSMUSG00000022053 D 0.722
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.722
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.722
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.722
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.722
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.722
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.722
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.722
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.722
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.722
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.722
EBF2 Sus scrofa ENSSSCG00000009655 I 0.722
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.722
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.722
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I 0.722
kn Drosophila melanogaster FBgn0001319 D 0.722
GF11778 Drosophila ananassae FBgn0088818 I 0.722
GG22397 Drosophila erecta FBgn0114569 I 0.722
GH20479 Drosophila grimshawi FBgn0127942 I 0.722
GL10656 Drosophila persimilis FBgn0148266 I 0.722
GM20182 Drosophila sechellia FBgn0175065 I 0.722
GJ21945 Drosophila virilis FBgn0209060 I 0.722
GK23295 Drosophila willistoni FBgn0225257 I 0.722
GE12286 Drosophila yakuba FBgn0230042 I 0.722
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.722
KGM_09934 Danaus plexippus KGM_09934 I 0.722
L798_15574 Zootermopsis nevadensis L798_15574 I 0.722
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.722
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.722
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.722
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.722
Cmyd_10009821 Chelonia mydas Cmyd_10009821 I 0.722
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.722
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.722
Myotis_brandtii_EBF2_10005813 Myotis brandtii Myotis_brandtii_EBF2_10005813 I 0.722
LDEC007542 Leptinotarsa decemlineata LDEC007542 I 0.722
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.722
ebf2.S Xenopus laevis XB-GENE-971141 I 0.722
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.722
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.722
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.722
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.722
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.722
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.722