SROB_0000545801 (Schistosoma rodhaini)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SROB_0000545801 T174969_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000545801-mRNA-1 EBF1 14 84

Links

Other EBF1 family TFs
Other Schistosoma rodhaini TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMTD_0000506301 Schistosoma mattheei SMTD_0000506301 N 0.946
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.926
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.875
Smp_194660 Schistosoma mansoni Smp_194660 N 0.875
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.875
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.875
csin100403 Clonorchis sinensis csin100403 N 0.853
T265_13606 Opisthorchis viverrini T265_13606 N 0.853
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
HelroG112029 Helobdella robusta HelroG112029 I 0.765
LotgiG225788 Lottia gigantea LotgiG225788 I 0.750
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.746
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.746
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.742
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.742
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.738
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.735
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.735
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.734
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.731
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.731
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.731
Tal_R004164 Tyto alba Tal_R004164 I 0.731
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.730
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.726
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.725
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.721
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.721
ACOM041529 Anopheles coluzzii ACOM041529 I 0.716
ACUA010350 Anopheles culicifacies ACUA010350 I 0.716
AFUN004906 Anopheles funestus AFUN004906 I 0.716
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.710
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.710
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.710
EBF1 Sus scrofa ENSSSCG00000017046 I 0.710
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.710
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.710
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.709
GJ21945 Drosophila virilis FBgn0209060 I 0.706
ACHR004409 Anopheles christyi ACHR004409 I 0.706
AFAF000230 Anopheles farauti AFAF000230 I 0.706
MDOA011385 Musca domestica MDOA011385 I 0.706
GH12956 Drosophila grimshawi FBgn0120434 I 0.700