Bo1g108650 (Brassica oleracea)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bo1g108650 T175006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.908 0.908
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.908 0.908
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.908 0.908
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.876 0.876
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.857 0.857
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.805 0.805
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g108650.1 EIN3 51 304

Links

Other EIN3 family TFs
Other Brassica oleracea TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.927
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.927
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.927
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.923
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.923
Bo5g106280 Brassica oleracea Bo5g106280 I 0.919
EIN3 Arabidopsis thaliana AT3G20770 D 0.908
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.898
TCM_042022 Theobroma cacao TCM_042022 I 0.894
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.894
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.891
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.890
Bra001802 Brassica rapa Bra001802 I 0.888
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.886
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.884
29708.m000185 Ricinus communis 29708.m000185 I 0.876
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.876
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.876
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.876
Bra000528 Brassica rapa Bra000528 I 0.875
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.874
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.874
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.873
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.873
EIL1 Arabidopsis thaliana AT2G27050 D 0.870
Bo3g076180 Brassica oleracea Bo3g076180 I 0.869
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.869
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.869
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.869
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.869
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.865
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.865
mgf018950m Mimulus guttatus mgf018950m I 0.865
Ca_07534 Cicer arietinum Ca_07534 I 0.862
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.861
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.861
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.861
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.861
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.861
Bo3g041690 Brassica oleracea Bo3g041690 I 0.857
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.857
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.857
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.857
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.857
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.857
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.857
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.853
Ca_10236 Cicer arietinum Ca_10236 I 0.853
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.850
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.850
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.849
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.849
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.849
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.849
mgf015996m Mimulus guttatus mgf015996m I 0.849
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.846
MDP0000202831 Malus domestica MDP0000202831 I 0.846
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.841
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.841
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.837
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.837
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.837
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.833
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.829
Pm017009 Prunus mume Pm017009 I 0.829
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.829
MDP0000212881 Malus domestica MDP0000212881 I 0.829
MDP0000564884 Malus domestica MDP0000564884 I 0.829
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.829
PK01239.1 Cannabis sativa PK01239.1 I 0.829
PK13351.1 Cannabis sativa PK13351.1 I 0.829
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.825
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.821
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.821
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.818
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.817
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.813
MDP0000306498 Malus domestica MDP0000306498 I 0.813
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.809
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.805
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.797
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.797
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.797
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.797
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.789
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.789
F775_28545 Aegilops tauschii F775_28545 I 0.789
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.789
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.789
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.789
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.789
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.789
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.789
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.789
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.789
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.789
OS03G0324200 Oryza sativa OS03G0324200 I 0.789
OS03G0324300 Oryza sativa OS03G0324300 I 0.789
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.789
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.789
mgf012394m Mimulus guttatus mgf012394m I 0.789
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.785
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.785
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.785
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.781
Si034616m.g Setaria italica Si034616m.g I 0.781
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.781
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.780
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.780
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.777
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.773
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.769
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.769
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.769
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.769
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.769
OS07G0685700 Oryza sativa OS07G0685700 I 0.769
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.766
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.765
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.765
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.757
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.753
Si029213m.g Setaria italica Si029213m.g I 0.741
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.733
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.729
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.725
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.725
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.723
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.721
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.721
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.717
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.713
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.713
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.705
OBART07G26760 Oryza barthii OBART07G26760 I 0.705
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.705
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.704
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.704
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.701
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.700
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.700
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.700