CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g118030
(
Brassica oleracea
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04873 (EIN3)
IPR006957
Bo6g118030
T175016_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.955
0.955
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.955
0.955
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN
NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.764
0.764
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.724
0.724
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g118030.1
EIN3
41
286
EDLERRMWKDRVRLKRIKERQKGDSQGPQAKEPPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGKEEWWVKLGLPQSQSPPYRKPHDLKKMWKVGVLTAVINHMSPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEE
Links
Other
EIN3
family TFs
Other
Brassica oleracea
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra015970
Brassica rapa
Bra015970
I
0.988
Thhalv10018327m.g
Eutrema salsugineum
Thhalv10018327m.g
I
0.967
EIL3
Arabidopsis lyrata
scaffold_202309.1
I
0.959
Cagra.0876s0005
Capsella grandiflora
Cagra.0876s0005
I
0.959
Carubv10020043m.g
Capsella rubella
Carubv10020043m.g
I
0.959
EIL3
Arabidopsis thaliana
AT1G73730
D
0.955
Bostr.3288s0016
Boechera stricta
Bostr.3288s0016
I
0.947
Bra008110
Brassica rapa
Bra008110
I
0.939
Bo6g087550
Brassica oleracea
Bo6g087550
I
0.927
cassava2120.valid.m1
Manihot esculenta
cassava2120.valid.m1
I
0.862
30169.m006395
Ricinus communis
30169.m006395
I
0.850
Cucsa.143220
Cucumis sativus
Cucsa.143220
I
0.846
POPTR_0001s05360
Populus trichocarpa
POPTR_0001s05360
I
0.837
gene20650-v1.0-hybrid
Fragaria vesca
gene20650-v1.0-hybrid
I
0.833
MDP0000490180
Malus domestica
MDP0000490180
I
0.833
SapurV1A.0850s0030
Salix purpurea
SapurV1A.0850s0030
I
0.833
PK19114.1
Cannabis sativa
PK19114.1
I
0.833
Eucgr.B03664
Eucalyptus grandis
Eucgr.B03664
I
0.830
POPTR_0003s22090
Populus trichocarpa
POPTR_0003s22090
I
0.829
Pm028171
Prunus mume
Pm028171
I
0.829
Ciclev10015261m.g
Citrus clementina
Ciclev10015261m.g
I
0.829
Lus10031245.g
Linum usitatissimum
Lus10031245.g
I
0.829
MDP0000562585
Malus domestica
MDP0000562585
I
0.829
MDP0000565880
Malus domestica
MDP0000565880
I
0.829
orange1.1g007662m.g
Citrus sinensis
orange1.1g007662m.g
I
0.829
EIL3
Vitis vinifera
VIT_06s0004g01610
I
0.825
PGSC0003DMG400029908
Solanum tuberosum
PGSC0003DMG400029908
I
0.821
PRUPE_ppa003113mg
Prunus persica
PRUPE_ppa003113mg
I
0.821
TCM_040510
Theobroma cacao
TCM_040510
I
0.821
Ca_02669
Cicer arietinum
Ca_02669
I
0.821
SapurV1A.0009s0320
Salix purpurea
SapurV1A.0009s0320
I
0.821
chr3.LjB09K03.50.nc
Lotus japonicus
chr3.LjB09K03.50.nc
I
0.821
MTR_2g098470
Medicago truncatula
MTR_2g098470
I
0.817
Lus10031817.g
Linum usitatissimum
Lus10031817.g
I
0.817
Solyc01g014480.2
Solanum lycopersicum
Solyc01g014480.2
I
0.813
Gorai.010G128700
Gossypium raimondii
Gorai.010G128700
I
0.813
GLYMA15G03650
Glycine max
GLYMA15G03650
I
0.810
Gorai.009G071400
Gossypium raimondii
Gorai.009G071400
I
0.806
Aquca_007_00017
Aquilegia coerulea
Aquca_007_00017
I
0.805
GLYMA13G41751
Glycine max
GLYMA13G41751
I
0.802
Bra003831
Brassica rapa
Bra003831
I
0.801
cassava30700.valid.m1
Manihot esculenta
cassava30700.valid.m1
I
0.801
mgf020935m
Mimulus guttatus
mgf020935m
I
0.797
Solyc01g006650.1
Solanum lycopersicum
Solyc01g006650.1
I
0.793
PGSC0003DMG400021381
Solanum tuberosum
PGSC0003DMG400021381
I
0.789
AMTR_s00022p00216890
Amborella trichopoda
AMTR_s00022p00216890
I
0.780
Si029259m.g
Setaria italica
Si029259m.g
I
0.772
Pavir.J02229
Panicum virgatum
Pavir.J02229
I
0.772
Pavir.J14329
Panicum virgatum
Pavir.J14329
I
0.772
GSMUA_Achr9G27680_001
Musa acuminata
GSMUA_Achr9G27680_001
I
0.768
OB09G21280
Oryza brachyantha
OB09G21280
I
0.768
OBART09G14750
Oryza barthii
OBART09G14750
I
0.768
OGLUM09G15380
Oryza glumaepatula
OGLUM09G15380
I
0.768
OMERI09G11470
Oryza meridionalis
OMERI09G11470
I
0.768
ONIVA08G17420
Oryza nivara
ONIVA08G17420
I
0.768
ORGLA09G0113600
Oryza glaberrima
ORGLA09G0113600
I
0.768
BGIOSGA029545
Oryza indica
BGIOSGA029545
I
0.764
ORUFI09G15900
Oryza rufipogon
ORUFI09G15900
I
0.764
OS09G0490200
Oryza sativa
OS09G0490200
D
0.764
GRMZM2G006752
Zea mays
GRMZM2G006752
I
0.760
F775_17920
Aegilops tauschii
F775_17920
I
0.756
MLOC_10823
Hordeum vulgare
MLOC_10823
I
0.756
OPUNC09G13210
Oryza punctata
OPUNC09G13210
I
0.756
Sb02g028390
Sorghum bicolor
Sb02g028390
I
0.756
Traes_5BL_B6051DD37
Triticum aestivum
Traes_5BL_B6051DD37
I
0.756
BRADI4G33750
Brachypodium distachyon
BRADI4G33750
I
0.752
Traes_5AL_B65EF5518
Triticum aestivum
Traes_5AL_B65EF5518
I
0.752
PDK_20s1301801g002
Phoenix dactylifera
PDK_20s1301801g002
I
0.752
GSMUA_Achr3G11160_001
Musa acuminata
GSMUA_Achr3G11160_001
I
0.748
GSMUA_Achr8G25580_001
Musa acuminata
GSMUA_Achr8G25580_001
I
0.748
LPERR09G10870
Leersia perrieri
LPERR09G10870
I
0.747
Gorai.013G250300
Gossypium raimondii
Gorai.013G250300
I
0.744
e_gw1.11.194.1
Physcomitrella patens
e_gw1.11.194.1
I
0.728
AMTR_s00119p00117410
Amborella trichopoda
AMTR_s00119p00117410
I
0.724
LPERR08G16890
Leersia perrieri
LPERR08G16890
I
0.724
Traes_7BS_733347AC0
Triticum aestivum
Traes_7BS_733347AC0
I
0.724
Traes_7DS_3673F1C73
Triticum aestivum
Traes_7DS_3673F1C73
I
0.724
e_gw1.87.73.1
Physcomitrella patens
e_gw1.87.73.1
D
0.724
Traes_7AS_34D476D5D1
Triticum aestivum
Traes_7AS_34D476D5D1
I
0.720
TRIUR3_28079
Triticum urartu
TRIUR3_28079
I
0.720
MLOC_10315
Hordeum vulgare
MLOC_10315
I
0.715
evm.TU.supercontig_103.60
Carica papaya
evm.TU.supercontig_103.60
I
0.715
AC234203.1_FG011
Zea mays
AC234203.1_FG011
I
0.711
TCM_042022
Theobroma cacao
TCM_042022
I
0.711
Bra000528
Brassica rapa
Bra000528
I
0.707
MTR_3g078770
Medicago truncatula
MTR_3g078770
I
0.707
POPTR_0001s05370
Populus trichocarpa
POPTR_0001s05370
I
0.707
cassava3620.m1
Manihot esculenta
cassava3620.m1
I
0.707
Ciclev10014617m.g
Citrus clementina
Ciclev10014617m.g
I
0.707
Eucgr.J00631
Eucalyptus grandis
Eucgr.J00631
I
0.707
Gorai.009G105400
Gossypium raimondii
Gorai.009G105400
I
0.707
orange1.1g007017m.g
Citrus sinensis
orange1.1g007017m.g
I
0.707
BGIOSGA012535
Oryza indica
BGIOSGA012535
I
0.703
Bo3g041690
Brassica oleracea
Bo3g041690
I
0.703
GLYMA14G04550
Glycine max
GLYMA14G04550
I
0.703
OGLUM03G15860
Oryza glumaepatula
OGLUM03G15860
I
0.703
OMERI03G14140
Oryza meridionalis
OMERI03G14140
I
0.703
OMERI08G16770
Oryza meridionalis
OMERI08G16770
I
0.703
ONIVA03G16680
Oryza nivara
ONIVA03G16680
I
0.703
OPUNC03G15240
Oryza punctata
OPUNC03G15240
I
0.703
ORGLA03G0150600
Oryza glaberrima
ORGLA03G0150600
I
0.703
ORUFI03G16290
Oryza rufipogon
ORUFI03G16290
I
0.703
OS03G0324200
Oryza sativa
OS03G0324200
I
0.703
OS03G0324300
Oryza sativa
OS03G0324300
I
0.703
Sb01g036740
Sorghum bicolor
Sb01g036740
I
0.703
SELMODRAFT_112063
Selaginella moellendorffii
SELMODRAFT_112063
I
0.703
SELMODRAFT_136229
Selaginella moellendorffii
SELMODRAFT_136229
I
0.703
VIT_13s0047g00250
Vitis vinifera
VIT_13s0047g00250
I
0.703
mgf018950m
Mimulus guttatus
mgf018950m
I
0.703
Gorai.004G227800
Gossypium raimondii
Gorai.004G227800
I
0.703
Pavir.Ia03450
Panicum virgatum
Pavir.Ia03450
I
0.703
Pavir.Ib01512
Panicum virgatum
Pavir.Ib01512
I
0.703