PGSC0003DMG400005915 (Solanum tuberosum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 PGSC0003DMG400005915 T175191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.715 0.715
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.708 0.708
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.708 0.708
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.708 0.708
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.874 0.874
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.841 0.841
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400015147 EIN3 52 188
PGSC0003DMT400015148 EIN3 47 294

Links

Other EIN3 family TFs
Other Solanum tuberosum TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.992
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.931
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.927
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.923
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.923
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.919
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.915
29708.m000185 Ricinus communis 29708.m000185 I 0.915
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.915
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.915
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.915
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.915
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.915
EIN3 Arabidopsis thaliana AT3G20770 D 0.911
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.911
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.906
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.906
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.906
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.906
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.906
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.906
TCM_042022 Theobroma cacao TCM_042022 I 0.906
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.906
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.906
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.906
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.906
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.906
Bo5g106280 Brassica oleracea Bo5g106280 I 0.903
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.902
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.902
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.902
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.902
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.898
Ca_10236 Cicer arietinum Ca_10236 I 0.894
Pm017009 Prunus mume Pm017009 I 0.894
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.894
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.894
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.894
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.894
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.894
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.894
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.894
PK13351.1 Cannabis sativa PK13351.1 I 0.894
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.890
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.890
MDP0000202831 Malus domestica MDP0000202831 I 0.890
Ca_07534 Cicer arietinum Ca_07534 I 0.886
mgf018950m Mimulus guttatus mgf018950m I 0.886
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.882
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.882
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.882
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.882
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.878
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.878
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.878
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.878
MDP0000212881 Malus domestica MDP0000212881 I 0.878
MDP0000306498 Malus domestica MDP0000306498 I 0.878
MDP0000564884 Malus domestica MDP0000564884 I 0.878
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.874
EIL1 Arabidopsis thaliana AT2G27050 D 0.870
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.870
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.870
PK01239.1 Cannabis sativa PK01239.1 I 0.870
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.866
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.866
Bra000528 Brassica rapa Bra000528 I 0.863
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.862
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.858
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.858
Bo1g108650 Brassica oleracea Bo1g108650 I 0.857
Bo3g041690 Brassica oleracea Bo3g041690 I 0.855
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.854
mgf015996m Mimulus guttatus mgf015996m I 0.849
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.846
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.841
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.841
Bra001802 Brassica rapa Bra001802 I 0.835
Bo3g076180 Brassica oleracea Bo3g076180 I 0.833
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.833
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.828
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.825
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.821
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.817
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.813
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.809
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.809
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.809
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.809
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.809
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.809
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.809
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.809
OS03G0324200 Oryza sativa OS03G0324200 I 0.809
OS03G0324300 Oryza sativa OS03G0324300 I 0.809
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.809
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.809
Si034616m.g Setaria italica Si034616m.g I 0.805
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.801
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.801
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.801
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
F775_28545 Aegilops tauschii F775_28545 I 0.797
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.797
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.797
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.797
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.793
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.793
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.793
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.792
mgf012394m Mimulus guttatus mgf012394m I 0.789
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.788
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.788
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.780
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.776
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.776
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.776
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.776
OS07G0685700 Oryza sativa OS07G0685700 I 0.776
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.773
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.766
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.766
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.757
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.753
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.741
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.737
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.737
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.736
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.736
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.735
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.733
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.732
Pm017011 Prunus mume Pm017011 I 0.731
Cla013874 Citrullus lanatus Cla013874 I 0.729
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.728
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.728
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.728
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.728
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.724
PK19114.1 Cannabis sativa PK19114.1 I 0.724
Si029213m.g Setaria italica Si029213m.g I 0.721
OBART07G26760 Oryza barthii OBART07G26760 I 0.720
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.720
MDP0000490180 Malus domestica MDP0000490180 I 0.720
MDP0000562585 Malus domestica MDP0000562585 I 0.720
MDP0000565880 Malus domestica MDP0000565880 I 0.720
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.720
Pm028171 Prunus mume Pm028171 I 0.719
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.717
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.717
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.715
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.715
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.715
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.713
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.713
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.713
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.711
TCM_040510 Theobroma cacao TCM_040510 I 0.711
30169.m006395 Ricinus communis 30169.m006395 I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
Ca_02669 Cicer arietinum Ca_02669 I 0.709
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.709
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.704
mgf020935m Mimulus guttatus mgf020935m I 0.704
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.703
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.703
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.703
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.703
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.703
Bra035746 Brassica rapa Bra035746 I 0.700
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.700