PGSC0003DMG400027507 (Solanum tuberosum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 PGSC0003DMG400027507 T175197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.874 0.874
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.866 0.866
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.866 0.866
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.866 0.866
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.846 0.846
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.817 0.817
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400070751 EIN3 44 291

Links

Other EIN3 family TFs
Other Solanum tuberosum TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.984
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.894
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.890
PK13351.1 Cannabis sativa PK13351.1 I 0.890
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.886
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.886
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.886
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.886
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.882
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.882
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.882
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.882
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.882
TCM_042022 Theobroma cacao TCM_042022 I 0.878
29708.m000185 Ricinus communis 29708.m000185 I 0.878
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.878
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.878
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.874
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.874
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.874
MDP0000202831 Malus domestica MDP0000202831 I 0.874
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.874
PK01239.1 Cannabis sativa PK01239.1 I 0.874
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.870
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.870
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.870
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.870
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.870
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.870
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.870
EIN3 Arabidopsis thaliana AT3G20770 D 0.866
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.866
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.866
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.866
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.866
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.866
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.866
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.866
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.866
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.866
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.862
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.862
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.862
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.862
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.862
Pm017009 Prunus mume Pm017009 I 0.862
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.862
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.862
MDP0000306498 Malus domestica MDP0000306498 I 0.862
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.862
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.862
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.862
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.858
MDP0000212881 Malus domestica MDP0000212881 I 0.858
MDP0000564884 Malus domestica MDP0000564884 I 0.858
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.858
Bo5g106280 Brassica oleracea Bo5g106280 I 0.855
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.854
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.854
Ca_07534 Cicer arietinum Ca_07534 I 0.854
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.854
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.854
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.851
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.851
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.851
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.850
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.850
Ca_10236 Cicer arietinum Ca_10236 I 0.850
mgf015996m Mimulus guttatus mgf015996m I 0.849
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.847
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.846
Bra000528 Brassica rapa Bra000528 I 0.843
EIL1 Arabidopsis thaliana AT2G27050 D 0.842
Bo3g041690 Brassica oleracea Bo3g041690 I 0.835
mgf012394m Mimulus guttatus mgf012394m I 0.833
mgf018950m Mimulus guttatus mgf018950m I 0.833
Bo1g108650 Brassica oleracea Bo1g108650 I 0.829
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.825
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.825
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.821
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.817
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.817
Bra001802 Brassica rapa Bra001802 I 0.815
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.813
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.813
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.810
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.810
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.809
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.809
Bo3g076180 Brassica oleracea Bo3g076180 I 0.805
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.805
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.802
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.798
F775_28545 Aegilops tauschii F775_28545 I 0.797
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.797
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.797
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.797
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.788
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.788
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.788
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.786
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.785
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.785
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.785
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.785
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.785
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.785
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.785
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.785
OS03G0324200 Oryza sativa OS03G0324200 I 0.785
OS03G0324300 Oryza sativa OS03G0324300 I 0.785
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.785
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.785
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.781
Si034616m.g Setaria italica Si034616m.g I 0.781
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.777
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.772
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.772
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.772
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.772
OS07G0685700 Oryza sativa OS07G0685700 I 0.772
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.766
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.761
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.761
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.757
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.751
OBART07G26760 Oryza barthii OBART07G26760 I 0.749
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.744
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.744
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.743
Si029213m.g Setaria italica Si029213m.g I 0.741
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.737
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.737
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.736
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.729
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.728
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.728
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.725
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.725
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.721
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.715
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.714
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.713
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.713
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.713
PK19114.1 Cannabis sativa PK19114.1 I 0.713
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.709
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.709
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
Pm028171 Prunus mume Pm028171 I 0.707
30169.m006395 Ricinus communis 30169.m006395 I 0.707
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.704
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.704
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.703
MDP0000490180 Malus domestica MDP0000490180 I 0.703
MDP0000562585 Malus domestica MDP0000562585 I 0.703
MDP0000565880 Malus domestica MDP0000565880 I 0.703
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.701
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.701
Ca_02669 Cicer arietinum Ca_02669 I 0.700
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.700
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.700