Solyc01g006650.1 (Solanum lycopersicum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Solyc01g006650.1 T175238_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.785 0.785
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.785 0.785
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.749 0.749
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g006650.1.1 EIN3 37 284

Links

Other EIN3 family TFs
Other Solanum lycopersicum TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.988
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.879
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.870
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.842
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.834
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.834
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.834
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.830
Ca_02669 Cicer arietinum Ca_02669 I 0.830
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.830
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.830
Pm028171 Prunus mume Pm028171 I 0.827
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.822
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.822
MDP0000490180 Malus domestica MDP0000490180 I 0.822
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.822
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.818
30169.m006395 Ricinus communis 30169.m006395 I 0.818
TCM_040510 Theobroma cacao TCM_040510 I 0.814
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.814
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.814
PK19114.1 Cannabis sativa PK19114.1 I 0.814
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.810
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.810
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.806
MDP0000562585 Malus domestica MDP0000562585 I 0.806
MDP0000565880 Malus domestica MDP0000565880 I 0.806
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.802
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.802
mgf020935m Mimulus guttatus mgf020935m I 0.802
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.798
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.797
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.794
Bo6g118030 Brassica oleracea Bo6g118030 I 0.793
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.793
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.793
Bra008110 Brassica rapa Bra008110 I 0.790
EIL3 Arabidopsis thaliana AT1G73730 D 0.789
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.789
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.789
Bo6g087550 Brassica oleracea Bo6g087550 I 0.787
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.786
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.785
Bra015970 Brassica rapa Bra015970 I 0.782
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.781
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.769
OB09G21280 Oryza brachyantha OB09G21280 I 0.763
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.757
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.755
F775_17920 Aegilops tauschii F775_17920 I 0.753
OBART09G14750 Oryza barthii OBART09G14750 I 0.753
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.753
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.753
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.753
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.753
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.753
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.753
Si029259m.g Setaria italica Si029259m.g I 0.749
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.749
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.746
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.743
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.741
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.740
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.740
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.740
OS09G0490200 Oryza sativa OS09G0490200 D 0.740
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.739
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.735
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.734
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.733
Cla006390 Citrullus lanatus Cla006390 I 0.731
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.731
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.730
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.727
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.725
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.725
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.725
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.725
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.723
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.723
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.723
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.719
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.711
Bra003831 Brassica rapa Bra003831 I 0.711
OB08G26880 Oryza brachyantha OB08G26880 I 0.711
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.709
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.707
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.705
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.705
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.704
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.703
Si013426m.g Setaria italica Si013426m.g I 0.700
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.700