Solyc01g014480.2 (Solanum lycopersicum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Solyc01g014480.2 T175240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.814 0.814
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.814 0.814
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.765 0.765
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.733 0.733
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.713 0.713
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.709 0.709
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.700 0.700
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.700 0.700
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g014480.2.1 EIN3 38 285

Links

Other EIN3 family TFs
Other Solanum lycopersicum TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.992
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.899
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.899
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.895
TCM_040510 Theobroma cacao TCM_040510 I 0.891
30169.m006395 Ricinus communis 30169.m006395 I 0.887
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.883
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.879
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.879
MDP0000490180 Malus domestica MDP0000490180 I 0.879
PK19114.1 Cannabis sativa PK19114.1 I 0.879
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.874
Ca_02669 Cicer arietinum Ca_02669 I 0.874
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.874
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.870
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.870
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.866
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.866
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.866
mgf020935m Mimulus guttatus mgf020935m I 0.862
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.862
MDP0000562585 Malus domestica MDP0000562585 I 0.862
MDP0000565880 Malus domestica MDP0000565880 I 0.862
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.854
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.854
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.854
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.850
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.850
Pm028171 Prunus mume Pm028171 I 0.847
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.846
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.838
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.838
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.834
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.834
Cla006390 Citrullus lanatus Cla006390 I 0.828
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.821
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.821
EIL3 Arabidopsis thaliana AT1G73730 D 0.817
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.817
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.817
Bo6g118030 Brassica oleracea Bo6g118030 I 0.813
Bo6g087550 Brassica oleracea Bo6g087550 I 0.811
Bra008110 Brassica rapa Bra008110 I 0.807
Bra015970 Brassica rapa Bra015970 I 0.806
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.806
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.800
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.786
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.785
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.778
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.769
OBART09G14750 Oryza barthii OBART09G14750 I 0.769
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.769
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.769
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.769
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.769
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.763
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.762
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.759
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.757
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.756
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.756
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.756
OS09G0490200 Oryza sativa OS09G0490200 D 0.756
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.754
F775_17920 Aegilops tauschii F775_17920 I 0.753
Si029259m.g Setaria italica Si029259m.g I 0.751
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.749
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.747
OB09G21280 Oryza brachyantha OB09G21280 I 0.747
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.747
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.746
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.745
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.739
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.737
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.736
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.735
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.734
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.734
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.734
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.733
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.731
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.731
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.729
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.729
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.728
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.727
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
TCM_042022 Theobroma cacao TCM_042022 I 0.724
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.724
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.724
Bra003831 Brassica rapa Bra003831 I 0.723
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.723
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.721
Si013426m.g Setaria italica Si013426m.g I 0.721
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.721
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.721
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.720
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.720
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.720
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.720
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.720
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.720
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.720
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.720
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.720
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.720
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.720
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.720
F775_28545 Aegilops tauschii F775_28545 I 0.717
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.717
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.717
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.717
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.715
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.715
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.715
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.715
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.715
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.715
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.715
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.715
PK13351.1 Cannabis sativa PK13351.1 I 0.715
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.714
EIL1 Arabidopsis thaliana AT2G27050 D 0.713
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.713
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.713
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.713
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.713
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.713
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.713
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.713
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.713
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.713
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.713
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.713
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.713
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.713
OS03G0324200 Oryza sativa OS03G0324200 I 0.713
OS03G0324300 Oryza sativa OS03G0324300 I 0.713
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.713
Si034616m.g Setaria italica Si034616m.g I 0.713
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.713
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.713
29708.m000185 Ricinus communis 29708.m000185 I 0.713
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.713
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.713
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.713
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.711
OB08G26880 Oryza brachyantha OB08G26880 I 0.711
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.711
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.711
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.711
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.711
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.711
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.711
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.711
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.711
MDP0000202831 Malus domestica MDP0000202831 I 0.711
MDP0000212881 Malus domestica MDP0000212881 I 0.711
MDP0000564884 Malus domestica MDP0000564884 I 0.711
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.709
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.709
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.709
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.708
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.707
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.707
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.707
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.707
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.707
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.707
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.707
Ca_07534 Cicer arietinum Ca_07534 I 0.707
Pm017009 Prunus mume Pm017009 I 0.707
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.707
MDP0000306498 Malus domestica MDP0000306498 I 0.707
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.707
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.707
PK01239.1 Cannabis sativa PK01239.1 I 0.707
Bra000528 Brassica rapa Bra000528 I 0.706
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.706
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.706
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.706
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.704
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.704
EIN3 Arabidopsis thaliana AT3G20770 D 0.703
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.703
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.703
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.703
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.703
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.703
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.703
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.703
Bo3g041690 Brassica oleracea Bo3g041690 I 0.702
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.702
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.700
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.700
Ca_10236 Cicer arietinum Ca_10236 I 0.700