CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10000964m.g
(
Capsella rubella
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
Carubv10000964m.g
T175330_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10000964m
EIN3
24
268
DDLKRRMWKDRNLMEKLKQQKGHYNDVVSLSTHRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFEQNAPDAITEYLTLAAAELIDKSSSSSFLHMLQDLQDTTLGSLLSALMQHCMPPQRRFPLEKGIAPPWWPTGSELWWGEQGAAHEHGAPPYRKPHDLRKSWKVSVLAAVIKHMSPNLGRVRRLARQSKSLQDKMMAKETDTWSRVLNQEE
Links
Other
EIN3
family TFs
Other
Capsella rubella
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EIL4
Arabidopsis thaliana
AT5G10120
N
0.927
fgenesh2_kg.6__972__AT5G10120.1
Arabidopsis lyrata
fgenesh2_kg.6__972__AT5G10120.1
N
0.927
Bo2g009710
Brassica oleracea
Bo2g009710
N
0.878
Bra028601
Brassica rapa
Bra028601
N
0.849
Bo3g100500
Brassica oleracea
Bo3g100500
N
0.782
fgenesh2_kg.8__2548__AT5G65100.1
Arabidopsis lyrata
fgenesh2_kg.8__2548__AT5G65100.1
N
0.782
Cagra.0917s0076
Capsella grandiflora
Cagra.0917s0076
N
0.782
Carubv10028199m.g
Capsella rubella
Carubv10028199m.g
N
0.782
EIL5
Arabidopsis thaliana
AT5G65100
N
0.778
Thhalv10005551m.g
Eutrema salsugineum
Thhalv10005551m.g
N
0.778
Thhalv10015634m.g
Eutrema salsugineum
Thhalv10015634m.g
N
0.755
Bostr.13175s0089
Boechera stricta
Bostr.13175s0089
N
0.745
LjSGA_055593.1
Lotus japonicus
LjSGA_055593.1
I
0.737
evm.TU.supercontig_20.234
Carica papaya
evm.TU.supercontig_20.234
N
0.714
orange1.1g038853m.g
Citrus sinensis
orange1.1g038853m.g
N
0.709
Bostr.0568s0282
Boechera stricta
Bostr.0568s0282
N
0.706
Gorai.003G043500
Gossypium raimondii
Gorai.003G043500
N
0.702