Gorai.009G071400 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.009G071400 T175360_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.810 0.810
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.810 0.810
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.777 0.777
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.717 0.717
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.709 0.709
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G071400.1 EIN3 38 285
Gorai.009G071400.2 EIN3 38 285

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_040510 Theobroma cacao TCM_040510 I 0.891
30169.m006395 Ricinus communis 30169.m006395 I 0.891
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.891
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.887
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.887
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.883
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.879
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.879
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.879
PK19114.1 Cannabis sativa PK19114.1 I 0.879
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.874
MDP0000490180 Malus domestica MDP0000490180 I 0.874
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.870
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.870
MDP0000562585 Malus domestica MDP0000562585 I 0.870
MDP0000565880 Malus domestica MDP0000565880 I 0.870
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.870
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.866
Pm028171 Prunus mume Pm028171 I 0.866
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.866
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.862
Ca_02669 Cicer arietinum Ca_02669 I 0.858
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.854
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.850
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.846
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.846
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.842
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.838
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.838
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.822
mgf020935m Mimulus guttatus mgf020935m I 0.822
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.818
EIL3 Arabidopsis thaliana AT1G73730 D 0.810
Bo6g118030 Brassica oleracea Bo6g118030 I 0.806
Bra015970 Brassica rapa Bra015970 I 0.806
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.806
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.806
Bo6g087550 Brassica oleracea Bo6g087550 I 0.802
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.802
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.802
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.794
Bra008110 Brassica rapa Bra008110 I 0.794
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.794
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.794
OBART09G14750 Oryza barthii OBART09G14750 I 0.781
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.781
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.781
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.781
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.781
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.777
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.777
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.777
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.777
OS09G0490200 Oryza sativa OS09G0490200 D 0.777
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.777
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.769
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.765
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.765
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.765
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.761
F775_17920 Aegilops tauschii F775_17920 I 0.757
OB09G21280 Oryza brachyantha OB09G21280 I 0.757
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.757
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.753
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.753
Si029259m.g Setaria italica Si029259m.g I 0.753
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.753
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.745
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.745
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.741
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.737
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.733
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.729
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.729
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.725
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.721
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.721
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.721
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.721
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.721
Si013426m.g Setaria italica Si013426m.g I 0.717
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.717
Bra003831 Brassica rapa Bra003831 I 0.713
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.713
TCM_042022 Theobroma cacao TCM_042022 I 0.713
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.713
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.713
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.713
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.713
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.713
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.713
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.709
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.709
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.709
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.709
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.709
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.709
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.709
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.709
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.709
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.709
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.709
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.709
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.709
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.709
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.704
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.704
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.704
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.704
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.704
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.704
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.704
OBART08G19960 Oryza barthii OBART08G19960 I 0.704
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.704
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.704
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.704
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.704
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.704
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.704
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.704
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.704
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.704
OS03G0324200 Oryza sativa OS03G0324200 I 0.704
OS03G0324300 Oryza sativa OS03G0324300 I 0.704
OS08G0508700 Oryza sativa OS08G0508700 I 0.704
Si034616m.g Setaria italica Si034616m.g I 0.704
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.704
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.704
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.704
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.704
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.704
MDP0000212881 Malus domestica MDP0000212881 I 0.704
MDP0000564884 Malus domestica MDP0000564884 I 0.704
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.704
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.704
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.704
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.704
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.704
PK13351.1 Cannabis sativa PK13351.1 I 0.704
EIL1 Arabidopsis thaliana AT2G27050 D 0.700
Bra000528 Brassica rapa Bra000528 I 0.700
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.700
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.700
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.700
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.700
OB08G26880 Oryza brachyantha OB08G26880 I 0.700
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.700
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.700
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.700
29708.m000185 Ricinus communis 29708.m000185 I 0.700
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.700
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.700
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.700
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.700
PK01239.1 Cannabis sativa PK01239.1 I 0.700