chr2.CM0031.190.nc (Lotus japonicus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 chr2.CM0031.190.nc T175418_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.915 0.915
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.915 0.915
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.915 0.915
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.898 0.898
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.862 0.862
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.707 0.707
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0031.190.nc EIN3 48 295

Links

Other EIN3 family TFs
Other Lotus japonicus TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_10236 Cicer arietinum Ca_10236 I 0.959
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.955
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.955
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.955
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.951
TCM_042022 Theobroma cacao TCM_042022 I 0.951
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.951
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.951
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.947
29708.m000185 Ricinus communis 29708.m000185 I 0.947
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.947
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.943
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.943
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.939
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.939
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.939
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.938
Ca_07534 Cicer arietinum Ca_07534 I 0.935
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.931
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.931
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.931
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.927
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.927
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.927
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.923
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.923
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.923
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.919
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.919
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.919
EIN3 Arabidopsis thaliana AT3G20770 D 0.915
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.915
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.915
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.915
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.915
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.915
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.915
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.915
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.915
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.915
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.911
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.906
Pm017009 Prunus mume Pm017009 I 0.906
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.906
MDP0000202831 Malus domestica MDP0000202831 I 0.902
Bo5g106280 Brassica oleracea Bo5g106280 I 0.899
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.899
EIL1 Arabidopsis thaliana AT2G27050 D 0.895
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.894
MDP0000212881 Malus domestica MDP0000212881 I 0.894
MDP0000306498 Malus domestica MDP0000306498 I 0.894
MDP0000564884 Malus domestica MDP0000564884 I 0.894
PK13351.1 Cannabis sativa PK13351.1 I 0.894
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.890
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.890
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.890
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.890
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.890
PK01239.1 Cannabis sativa PK01239.1 I 0.890
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.887
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.887
Bra000528 Brassica rapa Bra000528 I 0.883
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.882
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.882
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.879
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.878
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.878
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.878
Bo3g041690 Brassica oleracea Bo3g041690 I 0.875
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.874
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.871
mgf018950m Mimulus guttatus mgf018950m I 0.865
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.865
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.862
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.861
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.858
Bo1g108650 Brassica oleracea Bo1g108650 I 0.857
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.857
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.857
mgf015996m Mimulus guttatus mgf015996m I 0.857
Bo3g076180 Brassica oleracea Bo3g076180 I 0.854
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.854
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.842
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.841
Bra001802 Brassica rapa Bra001802 I 0.839
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.837
gene00392-v1.0-hybrid Fragaria vesca gene00392-v1.0-hybrid I 0.832
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.831
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.825
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.822
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.822
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.819
mgf012394m Mimulus guttatus mgf012394m I 0.817
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.810
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.809
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.809
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.805
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.805
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.805
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.805
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.805
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.805
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.805
OS03G0324200 Oryza sativa OS03G0324200 I 0.805
OS03G0324300 Oryza sativa OS03G0324300 I 0.805
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.805
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.801
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
F775_28545 Aegilops tauschii F775_28545 I 0.797
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.797
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.797
Si034616m.g Setaria italica Si034616m.g I 0.797
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.797
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.797
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.793
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.793
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.789
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.789
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.789
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.789
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.789
OS07G0685700 Oryza sativa OS07G0685700 I 0.789
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.789
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.785
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.777
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.773
OBART07G26760 Oryza barthii OBART07G26760 I 0.770
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.765
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.757
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.755
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.753
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.752
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.748
Si029213m.g Setaria italica Si029213m.g I 0.745
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.743
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.741
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.741
Cla013874 Citrullus lanatus Cla013874 I 0.738
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.737
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.733
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.733
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.729
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.728
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.727
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.727
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.721
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.721
30169.m006395 Ricinus communis 30169.m006395 I 0.721
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.717
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.717
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.717
PK19114.1 Cannabis sativa PK19114.1 I 0.717
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.717
Pm028171 Prunus mume Pm028171 I 0.715
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.713
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.713
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.713
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.713
MDP0000490180 Malus domestica MDP0000490180 I 0.713
MDP0000562585 Malus domestica MDP0000562585 I 0.713
MDP0000565880 Malus domestica MDP0000565880 I 0.713
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.711
LjSGA_055593.1 Lotus japonicus LjSGA_055593.1 I 0.711
TCM_040510 Theobroma cacao TCM_040510 I 0.709
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.709
Ca_02669 Cicer arietinum Ca_02669 I 0.709
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.709
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.709
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.709
EIL3 Arabidopsis thaliana AT1G73730 D 0.707
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
Bra023927 Brassica rapa Bra023927 I 0.706
Bo6g087550 Brassica oleracea Bo6g087550 I 0.705
mgf020935m Mimulus guttatus mgf020935m I 0.704
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.704
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.703
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.703
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.703
Traes_2AS_409CAEDB6 Triticum aestivum Traes_2AS_409CAEDB6 I 0.702
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.700