genemark-nMf.1.1.scaf01112-processed-gene-0.4 (Meloidogyne floridensis)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 genemark-nMf.1.1.scaf01112-processed-gene-0.4 T178479_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPDEF
M02973_2.00 		Homo sapiens
AMCCGGATRTD
HAYATCCGGKT		 SELEX
Jolma et al.(2013)
SPDEF_1 		0.893 0.667
SPDEF
M02974_2.00 		Homo sapiens
ATRATCCGGGAMMHY
RDKKTCCCGGATYAT		 SELEX
Jolma et al.(2013)
SPDEF_2 		0.893 0.667
SPDEF
M02975_2.00 		Homo sapiens
RCAGDAAGAAGTAWWM
KWWTACTTCTTHCTGY		 SELEX
Jolma et al.(2013)
SPDEF_3 		0.893 0.667
SPDEF
M02976_2.00 		Homo sapiens
AMCCGGATRTD
HAYATCCGGKT		 SELEX
Jolma et al.(2013)
SPDEF_4 		0.893 0.667
SPDEF
M02977_2.00 		Homo sapiens
WTRATCCGGGACCMC
GKGGTCCCGGATYAW		 SELEX
Jolma et al.(2013)
SPDEF_5 		0.893 0.667
SPDEF
M02978_2.00 		Homo sapiens
RCAGDAAGAMGTAWHM
KDWTACKTCTTHCTGY		 SELEX
Jolma et al.(2013)
SPDEF_6 		0.893 0.667
SPDEF
M04748_2.00 		Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN		 SELEX
Yin et al.(2017)
SPDEF_eDBD_HT-SELEX 		0.893 0.667
SPDEF
M04750_2.00 		Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN		 SELEX
Yin et al.(2017)
SPDEF_FL_HT-SELEX 		0.893 0.667
SPDEF
M09530_2.00 		Homo sapiens
WVCMGGAWVY
RBWTCCKGBW		 Misc
Heinz et al.(2010)
VCaP-SPDEF_SRA014231 		0.893 0.667
SPDEF
M04749_2.00 		Homo sapiens
NAVCMGGATRYD
HRYATCCKGBTN		 SELEX
Yin et al.(2017)
SPDEF_eDBD_Methyl-HT-SELEX 		0.893 0.667
SPDEF
M04751_2.00 		Homo sapiens
NAVCMGKATRYD
HRYATMCKGBTN		 SELEX
Yin et al.(2017)
SPDEF_FL_Methyl-HT-SELEX 		0.893 0.667
Spdef
M00159_2.00 		Mus musculus
NNVMGGAHNN
NNDTCCKBNN		 PBM
Badis et al.(2009)
Spdef_0905 		0.878 0.654
Spdef
M01488_2.00 		Mus musculus
NDNVMGGAHN
NDTCCKBNHN		 PBM
Wei et al.(2010)
Spdef 		0.878 0.654
Ets98B
M03727_2.00 		Drosophila melanogaster
TAMCGGATGCN
NGCATCCGKTA		 SELEX
Nitta et al.(2015)
Ets98B_1 		0.856 0.617
Ets98B
M03728_2.00 		Drosophila melanogaster
TKGCGGATGCN
NGCATCCGCMA		 SELEX
Nitta et al.(2015)
Ets98B_2 		0.856 0.617
Ets98B
M03729_2.00 		Drosophila melanogaster
ATGATCCGGGACN
NGTCCCGGATCAT		 SELEX
Nitta et al.(2015)
Ets98B_3 		0.856 0.617
Ets98B
M03730_2.00 		Drosophila melanogaster
GSATMCGKTA
TAMCGKATSC		 SELEX
Nitta et al.(2015)
Ets98B_4 		0.856 0.617
Ets98B
M03731_2.00 		Drosophila melanogaster
ATGATCCGGGASN
NSTCCCGGATCAT		 SELEX
Nitta et al.(2015)
Ets98B_5 		0.856 0.617
Ets98B
M06191_2.00 		Drosophila melanogaster
ASCCGGAWC
GWTCCGGST		 B1H
Zhu et al.(2011)
Ets98B_SANGER_10_FBgn0005659 		0.856 0.617
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf01112-processed-gene-0.4-mRNA-1 Ets 584 666

Links

Other Ets family TFs
Other Meloidogyne floridensis TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc12522 Meloidogyne incognita Minc12522 I 0.997
Minc17377 Meloidogyne incognita Minc17377 I 0.997
MhA1_Contig367.frz3.gene4 Meloidogyne hapla MhA1_Contig367.frz3.gene4 I 0.997
ASU_11081 Ascaris suum ASU_11081 I 0.992
BXY_0473000 Bursaphelenchus xylophilus BXY_0473000 I 0.992
EVEC_0001170101 Enterobius vermicularis EVEC_0001170101 I 0.992
PTRK_0001608800 Parastrongyloides trichosuri PTRK_0001608800 I 0.992
SPAL_0001077000 Strongyloides papillosus SPAL_0001077000 I 0.992
SSTP_0001090100 Strongyloides stercoralis SSTP_0001090100 I 0.992
SVE_1980500 Strongyloides venezuelensis SVE_1980500 I 0.992
TCNE_0000935601 Toxocara canis TCNE_0000935601 I 0.992
L596_g5779 Steinernema carpocapsae L596_g5779 I 0.991
L889_g30192 Steinernema feltiae L889_g30192 I 0.991
L892_g3915 Steinernema scapterisci L892_g3915 I 0.991
L893_g26809 Steinernema glaseri L893_g26809 I 0.991
L898_g2231 Steinernema monticolum L898_g2231 I 0.991
WUBG_02585 Wuchereria bancrofti WUBG_02585 I 0.990
Bm3502 Brugia malayi Bm3502 I 0.990
LOAG_13336 Loa loa LOAG_13336 I 0.990
Ppa-ets-4 Pristionchus pacificus PPA05668 I 0.990
WBGene00242060 Onchocerca volvulus WBGene00242060 I 0.990
ACAC_0000355601 Angiostrongylus cantonensis ACAC_0000355601 I 0.990
ANCCAN_05238 Ancylostoma caninum ANCCAN_05238 I 0.990
ANCCEY_07824 Ancylostoma ceylanicum ANCCEY_07824 I 0.990
ANCDUO_13439 Ancylostoma duodenale ANCDUO_13439 I 0.990
BTMF_0001332301 Brugia timori BTMF_0001332301 I 0.990
DME_0000328201 Dracunculus medinensis DME_0000328201 I 0.990
EEL_0000969001 Elaeophora elaphi EEL_0000969001 I 0.990
GPUH_0000363301 Gongylonema pulchrum GPUH_0000363301 I 0.990
HCOI00762500 Haemonchus contortus HCOI00762500 I 0.990
nAv.1.0.1.g03172 Acanthocheilonema viteae nAv.1.0.1.g03172 I 0.990
nAv.1.0.1.g05129 Acanthocheilonema viteae nAv.1.0.1.g05129 I 0.990
nAv.1.0.1.g05865 Acanthocheilonema viteae nAv.1.0.1.g05865 I 0.990
nDi.2.2.2.g02599 Dirofilaria immitis nDi.2.2.2.g02599 I 0.990
nLs.2.1.2.g03354 Litomosoides sigmodontis nLs.2.1.2.g03354 I 0.990
nOo.2.0.1.g02415 Onchocerca ochengi nOo.2.0.1.g02415 I 0.990
OESDEN_05539 Oesophagostomum dentatum OESDEN_05539 I 0.990
OFLC_0001252601 Onchocerca flexuosa OFLC_0001252601 I 0.990
RSKR_0000577300 Rhabditophanes kr3021 RSKR_0000577300 I 0.989
TCLT_0000444401 Thelazia callipaeda TCLT_0000444401 I 0.989
CBG10834 Caenorhabditis briggsae CBG10834 I 0.987
CBN23969 Caenorhabditis brenneri CBN23969 I 0.987
CRE00614 Caenorhabditis remanei CRE00614 I 0.987
ets-4 Caenorhabditis elegans WBGene00017687 I 0.987
CGOC_0000920101 Cylicostephanus goldi CGOC_0000920101 I 0.967
DICVIV_08502 Dictyocaulus viviparus DICVIV_08502 I 0.967
HCOI01123400 Haemonchus contortus HCOI01123400 I 0.967
NECAME_17353 Necator americanus NECAME_17353 I 0.967
SVUK_0000082401 Strongylus vulgaris SVUK_0000082401 I 0.967
PEQ_0000187701 Parascaris equorum PEQ_0000187701 I 0.940
SPDEF Takifugu rubripes ENSTRUG00000011048 I 0.921
SPDEF Tetraodon nigroviridis ENSTNIG00000001703 I 0.919
Sakowv30001869m.g Saccoglossus kowalevskii Sakowv30001869m.g I 0.919
ENSLOCG00000009979 Lepisosteus oculatus ENSLOCG00000009979 I 0.909
ENSAMXG00000016751 Astyanax mexicanus ENSAMXG00000016751 I 0.908
ENSGACG00000004912 Gasterosteus aculeatus ENSGACG00000004912 I 0.908
ENSGMOG00000000105 Gadus morhua ENSGMOG00000000105 I 0.908
ENSONIG00000014752 Oreochromis niloticus ENSONIG00000014752 I 0.908
ENSPFOG00000015137 Poecilia formosa ENSPFOG00000015137 I 0.908
CGI_10015191 Crassostrea gigas CGI_10015191 I 0.907
SPDEF Cavia porcellus ENSCPOG00000020697 I 0.904
SPDEF Equus caballus ENSECAG00000021717 I 0.904
ENSOARG00000010751 Ovis aries ENSOARG00000010751 I 0.904
CGI_10015192 Crassostrea gigas CGI_10015192 I 0.893
SPDEF Anolis carolinensis ENSACAG00000015770 I 0.893
SPDEF Bos taurus ENSBTAG00000021993 I 0.893
SPDEF Canis familiaris ENSCAFG00000001227 I 0.893
SPDEF Callithrix jacchus ENSCJAG00000015294 I 0.893
ENSCSAG00000009798 Chlorocebus sabaeus ENSCSAG00000009798 I 0.893
Spdef Dipodomys ordii ENSDORG00000016134 I 0.893
SPDEF Echinops telfairi ENSETEG00000005883 I 0.893
SPDEF Felis catus ENSFCAG00000015357 I 0.893
SPDEF Homo sapiens ENSG00000124664 D 0.893
SPDEF Gallus gallus ENSGALG00000002792 I 0.893
SPDEF Gorilla gorilla ENSGGOG00000000383 I 0.893
ENSLACG00000017022 Latimeria chalumnae ENSLACG00000017022 I 0.893
SPDEF Microcebus murinus ENSMICG00000013437 I 0.893
SPDEF Myotis lucifugus ENSMLUG00000025914 I 0.893
ENSMMUG00000007812 Macaca mulatta ENSMMUG00000007812 I 0.893
SPDEF Monodelphis domestica ENSMODG00000013916 I 0.893
ENSMPUG00000003167 Mustela putorius furo ENSMPUG00000003167 I 0.893
ENSNLEG00000008374 Nomascus leucogenys ENSNLEG00000008374 I 0.893
SPDEF Ornithorhynchus anatinus ENSOANG00000008044 I 0.893
SPDEF Otolemur garnettii ENSOGAG00000011260 I 0.893
ENSPANG00000016482 Papio anubis ENSPANG00000016482 I 0.893
ENSPPYG00000016518 Pongo abelii ENSPPYG00000016518 I 0.893
ENSPSIG00000004860 Pelodiscus sinensis ENSPSIG00000004860 I 0.893
SPDEF Pan troglodytes ENSPTRG00000018065 I 0.893
SPDEF Pteropus vampyrus ENSPVAG00000015594 I 0.893
ENSSARG00000011301 Sorex araneus ENSSARG00000011301 I 0.893
ENSSHAG00000004899 Sarcophilus harrisii ENSSHAG00000004899 I 0.893
ENSSTOG00000028807 Ictidomys tridecemlineatus ENSSTOG00000028807 I 0.893
SPDEF Tetraodon nigroviridis ENSTNIG00000018309 I 0.893
SPDEF Takifugu rubripes ENSTRUG00000001430 I 0.893
SPDEF Tursiops truncatus ENSTTRG00000007816 I 0.893
Aan_R003780 Calypte anna Aan_R003780 I 0.893
Alligator_sinensis_CCG020447.1 Alligator sinensis Alligator_sinensis_CCG020447.1 I 0.893
Cmyd_10011181 Chelonia mydas Cmyd_10011181 I 0.893
ENSP00000363149-D1 Bos grunniens ENSP00000363149-D1 I 0.893
ENSP00000363149 Macaca fascicularis ENSP00000363149 I 0.893
Myotis_brandtii_SPDEF_10017789 Myotis brandtii Myotis_brandtii_SPDEF_10017789 I 0.893
Ogr09009 Ophisaurus gracilis Ogr09009 I 0.893
Pvit_06029 Pogona vitticeps Pvit_06029 I 0.893
spdef Xenopus tropicalis XB-GENE-491205 I 0.893
ENSSSCG00000024531 Sus scrofa ENSSSCG00000024531 I 0.892
SPDEF Ochotona princeps ENSOPRG00000009328 I 0.890
e_gw.6.372.1 Branchiostoma floridae e_gw.6.372.1 I 0.888
RPRC004402 Rhodnius prolixus RPRC004402 I 0.886
CLEC002637 Cimex lectularius CLEC002637 I 0.886
CapteG171657 Capitella teleta CapteG171657 I 0.885
SPDEF Loxodonta africana ENSLAFG00000002253 I 0.878
Spdef Mus musculus ENSMUSG00000024215 D 0.878
Spdef Rattus norvegicus ENSRNOG00000000491 I 0.878
ENSFALG00000003770 Ficedula albicollis ENSFALG00000003770 I 0.877
SPDEF Taeniopygia guttata ENSTGUG00000001781 I 0.877
ENSAMEG00000000981 Ailuropoda melanoleuca ENSAMEG00000000981 I 0.875
Afo_R002084 Aptenodytes forsteri Afo_R002084 I 0.875
PHUM503640 Pediculus humanus PHUM503640 I 0.874
fgenesh2_pg.scaffold_113000046 Branchiostoma floridae fgenesh2_pg.scaffold_113000046 I 0.865
ENSVPAG00000011404 Vicugna pacos ENSVPAG00000011404 I 0.863
HelroG127646 Helobdella robusta HelroG127646 I 0.862
LotgiG140186 Lottia gigantea LotgiG140186 I 0.861
BGLB000499 Biomphalaria glabrata BGLB000499 I 0.857
AAEL005147 Aedes aegypti AAEL005147 I 0.856
ACEP13202 Atta cephalotes ACEP13202 I 0.856
AGAP011341 Anopheles gambiae AGAP011341 I 0.856
BGIBMGA001296 Bombyx mori BGIBMGA001296 I 0.856
Ets98B Drosophila melanogaster FBgn0005659 D 0.856
GF16302 Drosophila ananassae FBgn0093324 I 0.856
GG11574 Drosophila erecta FBgn0103871 I 0.856
GH16564 Drosophila grimshawi FBgn0124035 I 0.856
GI22028 Drosophila mojavensis FBgn0144757 I 0.856
GL13714 Drosophila persimilis FBgn0151319 I 0.856
GM16357 Drosophila sechellia FBgn0171272 I 0.856
GD21351 Drosophila simulans FBgn0192788 I 0.856
GJ10475 Drosophila virilis FBgn0197755 I 0.856
GK11770 Drosophila willistoni FBgn0213781 I 0.856
GE23760 Drosophila yakuba FBgn0240917 I 0.856
GA27000 Drosophila pseudoobscura FBgn0248371 I 0.856
GB50829 Apis mellifera GB50829 I 0.856
ISCW005284 Ixodes scapularis ISCW005284 I 0.856
KGM_21536 Danaus plexippus KGM_21536 I 0.856
NV12052 Nasonia vitripennis NV12052 I 0.856
SMAR015178 Strigamia maritima SMAR015178 I 0.856
TC008243 Tribolium castaneum TC008243 I 0.856
tetur10g01220 Tetranychus urticae tetur10g01220 I 0.856
YQE_03066 Dendroctonus ponderosae YQE_03066 I 0.856
Cflo_02996--XP_396511.3_APIME Camponotus floridanus Cflo_02996--XP_396511.3_APIME I 0.856
Hsal_06802--XP_396511.3_APIME Harpegnathos saltator Hsal_06802--XP_396511.3_APIME I 0.856
fgenesh2_pg.scaffold_297000075 Branchiostoma floridae fgenesh2_pg.scaffold_297000075 I 0.856
LCUP001713 Lucilia cuprina LCUP001713 I 0.856
AALB004027 Anopheles albimanus AALB004027 I 0.856
AARA006222 Anopheles arabiensis AARA006222 I 0.856
AATE008235 Anopheles atroparvus AATE008235 I 0.856
ACOM037974 Anopheles coluzzii ACOM037974 I 0.856
ACUA005433 Anopheles culicifacies ACUA005433 I 0.856
ADIR002130 Anopheles dirus ADIR002130 I 0.856
AEPI002241 Anopheles epiroticus AEPI002241 I 0.856
AFAF002698 Anopheles farauti AFAF002698 I 0.856
AFUN007103 Anopheles funestus AFUN007103 I 0.856
AMAM008021 Anopheles maculatus AMAM008021 I 0.856
AMEC015581 Anopheles melas AMEC015581 I 0.856
AMEM008533 Anopheles merus AMEM008533 I 0.856
AMIN004239 Anopheles minimus AMIN004239 I 0.856
AQUA002229 Anopheles quadriannulatus AQUA002229 I 0.856
ASIS007112 Anopheles sinensis ASIS007112 I 0.856
ASTEI04247 Anopheles stephensi ASTEI04247 I 0.856
LLOJ008642 Lutzomyia longipalpis LLOJ008642 I 0.856
MDOA013732 Musca domestica MDOA013732 I 0.856
PPAI004682 Phlebotomus papatasi PPAI004682 I 0.856
DAPPUDRAFT_8447 Daphnia pulex DAPPUDRAFT_8447 I 0.855
SNAPOd2T00009984001 Oikopleura dioica SNAPOd2T00009984001 I 0.855
LOAG_10256 Loa loa LOAG_10256 N 0.852
SPU_008528 Strongylocentrotus purpuratus SPU_008528 I 0.850
Ocbimv22034220m.g Octopus bimaculoides Ocbimv22034220m.g I 0.831
elf5l Xenopus tropicalis XB-GENE-919648 I 0.827
SPDEF Oryctolagus cuniculus ENSOCUG00000009812 I 0.805
Brh_R004752 Buceros rhinoceros Brh_R004752 I 0.802
MCINX010888 Melitaea cinxia MCINX010888 I 0.782
HDID_0000070401 Hymenolepis diminuta HDID_0000070401 I 0.782
YQE_01220 Dendroctonus ponderosae YQE_01220 I 0.774
YQE_01278 Dendroctonus ponderosae YQE_01278 I 0.774
YQE_04173 Dendroctonus ponderosae YQE_04173 I 0.774
ACYPI008332 Acyrthosiphon pisum ACYPI008332 I 0.768
SMU15002081 Schmidtea mediterranea SMU15002081 I 0.765
TTAC_0000221001 Hydatigera taeniaeformis TTAC_0000221001 I 0.763
DAPPUDRAFT_43728 Daphnia pulex DAPPUDRAFT_43728 I 0.758
HMEL016694 Heliconius melpomene HMEL016694 I 0.758
KGM_21233 Danaus plexippus KGM_21233 I 0.758
RPRC011718 Rhodnius prolixus RPRC011718 I 0.758
Hsal_02393--NP_001011631.1_APIME Harpegnathos saltator Hsal_02393--NP_001011631.1_APIME I 0.758
CLEC003449 Cimex lectularius CLEC003449 I 0.758
HHAL010647-PA Halyomorpha halys HHAL010647-PA I 0.758
LDEC012729 Leptinotarsa decemlineata LDEC012729 I 0.758
NEMVEDRAFT_v1g95374 Nematostella vectensis NEMVEDRAFT_v1g95374 I 0.747
ENSGMOG00000010043 Gadus morhua ENSGMOG00000010043 I 0.738
ML00367a Mnemiopsis leidyi ML00367a I 0.729
SMAR015069 Strigamia maritima SMAR015069 I 0.729
BGIBMGA001167 Bombyx mori BGIBMGA001167 I 0.727
L798_11471 Zootermopsis nevadensis L798_11471 I 0.727
TC007831 Tribolium castaneum TC007831 I 0.727
ECANG7_01477 Echinococcus canadensis ECANG7_01477 I 0.726
EmuJ_000770200 Echinococcus multilocularis EmuJ_000770200 I 0.726
TsM_000593600 Taenia solium TsM_000593600 I 0.726
CpipJ_CPIJ002465 Culex pipiens CpipJ_CPIJ002465 I 0.725
AAEL007700 Aedes aegypti AAEL007700 I 0.725
AGAP009513 Anopheles gambiae AGAP009513 I 0.725
CPIJ002465 Culex quinquefasciatus CPIJ002465 I 0.725
ENSPMAG00000002241 Petromyzon marinus ENSPMAG00000002241 I 0.725
ENSPMAG00000006043 Petromyzon marinus ENSPMAG00000006043 I 0.725
AALB000193 Anopheles albimanus AALB000193 I 0.725
AARA011867 Anopheles arabiensis AARA011867 I 0.725
ACHR005435 Anopheles christyi ACHR005435 I 0.725
ACOM032416 Anopheles coluzzii ACOM032416 I 0.725
ACUA007244 Anopheles culicifacies ACUA007244 I 0.725
ADIR006015 Anopheles dirus ADIR006015 I 0.725
AEPI004897 Anopheles epiroticus AEPI004897 I 0.725
AFUN005300 Anopheles funestus AFUN005300 I 0.725
AMAM020194 Anopheles maculatus AMAM020194 I 0.725
AMEC012045 Anopheles melas AMEC012045 I 0.725
AMEM014975 Anopheles merus AMEM014975 I 0.725
AMIN001885 Anopheles minimus AMIN001885 I 0.725
AQUA005811 Anopheles quadriannulatus AQUA005811 I 0.725
ASTEI03828 Anopheles stephensi ASTEI03828 I 0.725
PPAI004227 Phlebotomus papatasi PPAI004227 I 0.725
PHUM117320 Pediculus humanus PHUM117320 I 0.721
SMU15006886 Schmidtea mediterranea SMU15006886 N 0.720
ML09109a Mnemiopsis leidyi ML09109a I 0.718