CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra020611
(
Brassica rapa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Bra020611
T179107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020611.1-P
FAR1
66
165
EHYTTFARKTGFSIRKARSTESHNLGVYRRDFVCYRSGFNQPRKKPNVPHPRERKSLRCGCDAKLYLTKQVLAIEGTTTTTKTQWYVSQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Brassica rapa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g152930
Brassica oleracea
Bo2g152930
N
0.899
Bostr.29827s0002
Boechera stricta
Bostr.29827s0002
N
0.876
Thhalv10003748m.g
Eutrema salsugineum
Thhalv10003748m.g
N
0.876
FRS10
Arabidopsis thaliana
AT5G28530
N
0.865
Cagra.13833s0001
Capsella grandiflora
Cagra.13833s0001
N
0.865
Carubv10000250m.g
Capsella rubella
Carubv10000250m.g
N
0.865
PK09224.1
Cannabis sativa
PK09224.1
N
0.865
PRUPE_ppa002284mg
Prunus persica
PRUPE_ppa002284mg
N
0.854
TCM_020251
Theobroma cacao
TCM_020251
N
0.854
FRS10
Vitis vinifera
VIT_12s0057g00960
N
0.854
28859.m000324
Ricinus communis
28859.m000324
N
0.854
mgf004308m
Mimulus guttatus
mgf004308m
N
0.854
Ciclev10014481m.g
Citrus clementina
Ciclev10014481m.g
N
0.854
Eucgr.H00883
Eucalyptus grandis
Eucgr.H00883
N
0.854
gene15606-v1.0-hybrid
Fragaria vesca
gene15606-v1.0-hybrid
N
0.854
orange1.1g005579m.g
Citrus sinensis
orange1.1g005579m.g
N
0.854
Solyc07g045520.2
Solanum lycopersicum
Solyc07g045520.2
N
0.843
cassava40276.m1
Manihot esculenta
cassava40276.m1
N
0.843
Gorai.005G129200
Gossypium raimondii
Gorai.005G129200
N
0.843
FRS10
Populus trichocarpa
POPTR_0014s16500
N
0.831
Pm015052
Prunus mume
Pm015052
N
0.831
SapurV1A.0054s0360
Salix purpurea
SapurV1A.0054s0360
N
0.831
VIT_00s0194g00200
Vitis vinifera
VIT_00s0194g00200
N
0.719
TCM_030416
Theobroma cacao
TCM_030416
N
0.708
Cucsa.044640
Cucumis sativus
Cucsa.044640
N
0.708
Ciclev10014474m.g
Citrus clementina
Ciclev10014474m.g
N
0.708
Eucgr.D01451
Eucalyptus grandis
Eucgr.D01451
N
0.708
orange1.1g005549m.g
Citrus sinensis
orange1.1g005549m.g
N
0.708