CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FRS1
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0003s10970
T180073_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s10970.1
FAR1
98
207
SFYKEYAKSVGFSTITKASRRSRISGKFIDAKFVCTRYGTKRDTSTIELPQPVSNADAATSLPVKRKRGRINQSWSKTDCKACMHVKRRQQDGRWVVRSFIKEHNHEIFP
POPTR_0003s10970.2
FAR1
98
207
SFYKEYAKSVGFSTITKASRRSRISGKFIDAKFVCTRYGTKRDTSTIELPQPVSNADAATSLPVKRKRGRINQSWSKTDCKACMHVKRRQQDGRWVVRSFIKEHNHEIFP
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0325s0180
Salix purpurea
SapurV1A.0325s0180
N
0.978
FRS1
Vitis vinifera
VIT_01s0011g01470
N
0.900
TCM_006022
Theobroma cacao
TCM_006022
N
0.833
Solyc02g068550.1
Solanum lycopersicum
Solyc02g068550.1
N
0.811
Cucsa.134500
Cucumis sativus
Cucsa.134500
N
0.811
Bostr.30275s0471
Boechera stricta
Bostr.30275s0471
N
0.800
Gorai.002G163900
Gossypium raimondii
Gorai.002G163900
N
0.800
PRUPE_ppa001166mg
Prunus persica
PRUPE_ppa001166mg
N
0.798
Cagra.2564s0022
Capsella grandiflora
Cagra.2564s0022
N
0.789
Carubv10004190m.g
Capsella rubella
Carubv10004190m.g
N
0.789
FRS1
Arabidopsis thaliana
AT4G19990
N
0.778
Eucgr.D00033
Eucalyptus grandis
Eucgr.D00033
N
0.778
MDP0000236134
Malus domestica
MDP0000236134
N
0.775
TCM_013043
Theobroma cacao
TCM_013043
I
0.769
Bo1g022120
Brassica oleracea
Bo1g022120
N
0.744
gene19997-v1.0-hybrid
Fragaria vesca
gene19997-v1.0-hybrid
N
0.744
Thhalv10024475m.g
Eutrema salsugineum
Thhalv10024475m.g
N
0.744
SapurV1A.0767s0100
Salix purpurea
SapurV1A.0767s0100
I
0.731