CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava41407.m1
(
Manihot esculenta
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
cassava41407.m1
T181060_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava41407.m1
FAR1
11
102
EFYIAYGRHIGFIVRIHHNRRSRVNNMVIGQDFVCSKEGFREKKYICRKDRVLPPPPITREGCPAMLRLALRDGVKWVVTKFIKEHNHPLMS
Links
Other
FAR1
family TFs
Other
Manihot esculenta
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30178.m000862
Ricinus communis
30178.m000862
N
0.933
cassava27410.m1
Manihot esculenta
cassava27410.m1
N
0.933
Gorai.N002500
Gossypium raimondii
Gorai.N002500
N
0.922
TCM_002654
Theobroma cacao
TCM_002654
N
0.889
Ciclev10016736m.g
Citrus clementina
Ciclev10016736m.g
N
0.889
evm.TU.supercontig_8.51
Carica papaya
evm.TU.supercontig_8.51
N
0.878
TCM_020030
Theobroma cacao
TCM_020030
N
0.856
GLYMA13G41920
Glycine max
GLYMA13G41920
N
0.844
GLYMA15G03470
Glycine max
GLYMA15G03470
N
0.844
POPTR_0002s24030
Populus trichocarpa
POPTR_0002s24030
N
0.844
PRUPE_ppa010254mg
Prunus persica
PRUPE_ppa010254mg
N
0.844
PRUPE_ppa018791mg
Prunus persica
PRUPE_ppa018791mg
N
0.844
VIT_00s0174g00140
Vitis vinifera
VIT_00s0174g00140
N
0.844
VIT_05s0102g00410
Vitis vinifera
VIT_05s0102g00410
N
0.844
Pm022169
Prunus mume
Pm022169
N
0.844
cassava19692.m1
Manihot esculenta
cassava19692.m1
N
0.844
evm.TU.supercontig_9.294
Carica papaya
evm.TU.supercontig_9.294
N
0.844
MDP0000846736
Malus domestica
MDP0000846736
N
0.833
SapurV1A.0071s0650
Salix purpurea
SapurV1A.0071s0650
N
0.811
POPTR_0007s01940
Populus trichocarpa
POPTR_0007s01940
N
0.809
MTR_2g098880
Medicago truncatula
MTR_2g098880
N
0.800
Cla011016
Citrullus lanatus
Cla011016
N
0.800
Cucsa.094760
Cucumis sativus
Cucsa.094760
N
0.800
SapurV1A.0834s0150
Salix purpurea
SapurV1A.0834s0150
N
0.764