CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.22252s0282
(
Boechera stricta
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Bostr.22252s0282
T181238_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.22252s0282.1.p
FAR1
54
143
SFYDNYATVMGFVMRVDAFRKSMRDGTVVWRRLVCNKEGFRRLRPRRSESRKPRAITREGCKALIIVKREKSVKWVVTKFVKEHNHPLLP
Links
Other
FAR1
family TFs
Other
Boechera stricta
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0133s0093
Capsella grandiflora
Cagra.0133s0093
N
0.944
Carubv10014621m.g
Capsella rubella
Carubv10014621m.g
N
0.944
AT3G07500
Arabidopsis thaliana
AT3G07500
N
0.911
scaffold_300886.1
Arabidopsis lyrata
scaffold_300886.1
N
0.911
Bo5g141470
Brassica oleracea
Bo5g141470
N
0.856
VIT_00s0269g00010
Vitis vinifera
VIT_00s0269g00010
N
0.831
POPTR_0014s17500
Populus trichocarpa
POPTR_0014s17500
N
0.811
TCM_002647
Theobroma cacao
TCM_002647
N
0.811
30178.m000864
Ricinus communis
30178.m000864
N
0.811
Ciclev10016654m.g
Citrus clementina
Ciclev10016654m.g
N
0.811
evm.TU.supercontig_8.53
Carica papaya
evm.TU.supercontig_8.53
N
0.811
Gorai.N002600
Gossypium raimondii
Gorai.N002600
N
0.811
orange1.1g028717m.g
Citrus sinensis
orange1.1g028717m.g
N
0.811
SapurV1A.0137s0280
Salix purpurea
SapurV1A.0137s0280
N
0.811
VIT_00s0174g00120
Vitis vinifera
VIT_00s0174g00120
N
0.800
Eucgr.K02085
Eucalyptus grandis
Eucgr.K02085
N
0.800
PRUPE_ppa011264mg
Prunus persica
PRUPE_ppa011264mg
N
0.789
mgf009623m
Mimulus guttatus
mgf009623m
N
0.789
gene17500-v1.0-hybrid
Fragaria vesca
gene17500-v1.0-hybrid
N
0.789
Cla015099
Citrullus lanatus
Cla015099
N
0.778
MDP0000123745
Malus domestica
MDP0000123745
N
0.756
MDP0000243502
Malus domestica
MDP0000243502
N
0.756
Cucsa.388100
Cucumis sativus
Cucsa.388100
N
0.744
MDP0000156730
Malus domestica
MDP0000156730
N
0.733
MDP0000348552
Malus domestica
MDP0000348552
N
0.727