Carubv10000250m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10000250m.g T181262_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10000250m FAR1 194 286

Links

Other FAR1 family TFs
Other Capsella rubella TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FRS10 Arabidopsis thaliana AT5G28530 N 1.000
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 1.000
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.989
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.933
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.921
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.921
PK09224.1 Cannabis sativa PK09224.1 N 0.921
Bo2g152930 Brassica oleracea Bo2g152930 N 0.910
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.910
TCM_020251 Theobroma cacao TCM_020251 N 0.910
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.910
28859.m000324 Ricinus communis 28859.m000324 N 0.910
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.910
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.910
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.910
Pm015052 Prunus mume Pm015052 N 0.899
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.899
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.899
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.876
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.876
Bra020611 Brassica rapa Bra020611 N 0.865
mgf004308m Mimulus guttatus mgf004308m N 0.865
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.753
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.753
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.753
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.742
TCM_030416 Theobroma cacao TCM_030416 N 0.742
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.742
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.742
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.730
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.730
29758.m000681 Ricinus communis 29758.m000681 N 0.730
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.730
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.730
Cucsa.100320 Cucumis sativus Cucsa.100320 N 0.727
Ca_07896 Cicer arietinum Ca_07896 N 0.719
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.719
MDP0000249284 Malus domestica MDP0000249284 N 0.719