Carubv10008456m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10008456m.g T181268_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008456m FAR1 100 185

Links

Other FAR1 family TFs
Other Capsella rubella TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.4237s0016 Capsella grandiflora Cagra.4237s0016 N 1.000
Bostr.0124s0040 Boechera stricta Bostr.0124s0040 N 0.977
Thhalv10011274m.g Eutrema salsugineum Thhalv10011274m.g N 0.977
FRS6 Arabidopsis thaliana AT1G52520 N 0.965
Bo6g039630 Brassica oleracea Bo6g039630 N 0.930
FRS6 Vitis vinifera VIT_09s0002g07400 N 0.919
cassava6719.valid.m1 Manihot esculenta cassava6719.valid.m1 N 0.919
PRUPE_ppa002952mg Prunus persica PRUPE_ppa002952mg N 0.907
TCM_027271 Theobroma cacao TCM_027271 N 0.907
Pm013706 Prunus mume Pm013706 N 0.907
Ciclev10027619m.g Citrus clementina Ciclev10027619m.g N 0.907
Eucgr.J03078 Eucalyptus grandis Eucgr.J03078 N 0.895
evm.TU.supercontig_167.15 Carica papaya evm.TU.supercontig_167.15 N 0.895
Gorai.011G085000 Gossypium raimondii Gorai.011G085000 N 0.895
FRS6 Populus trichocarpa POPTR_0003s02570 N 0.872
Solyc03g117520.1 Solanum lycopersicum Solyc03g117520.1 N 0.872
gene15714-v1.0-hybrid Fragaria vesca gene15714-v1.0-hybrid N 0.872
PK01244.1 Cannabis sativa PK01244.1 N 0.872
SapurV1A.0199s0230 Salix purpurea SapurV1A.0199s0230 N 0.860
GLYMA09G02250 Glycine max GLYMA09G02250 N 0.849
GLYMA15G13150 Glycine max GLYMA15G13150 N 0.849
Cucsa.105540 Cucumis sativus Cucsa.105540 N 0.849
mg017777m Mimulus guttatus mg017777m N 0.849
Ca_07960 Cicer arietinum Ca_07960 N 0.826
chr6.CM0066.220.nc Lotus japonicus chr6.CM0066.220.nc N 0.767