CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G141900
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.011G141900
T181512_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G141900.1
FAR1
77
168
EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRAEKYTKKETRVFTSRPATREGCNAMLRIAAKDGGKWVIYGFVKEHNHVLNP
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_020031
Theobroma cacao
TCM_020031
N
0.944
cassava17506.valid.m1
Manihot esculenta
cassava17506.valid.m1
N
0.911
POPTR_0007s01930
Populus trichocarpa
POPTR_0007s01930
N
0.889
evm.TU.supercontig_9.289
Carica papaya
evm.TU.supercontig_9.289
N
0.889
PRUPE_ppa010562mg
Prunus persica
PRUPE_ppa010562mg
N
0.878
Pm007352
Prunus mume
Pm007352
N
0.878
Ciclev10021886m.g
Citrus clementina
Ciclev10021886m.g
N
0.878
orange1.1g029989m.g
Citrus sinensis
orange1.1g029989m.g
N
0.878
VIT_05s0102g00400
Vitis vinifera
VIT_05s0102g00400
N
0.867
29569.m000147
Ricinus communis
29569.m000147
N
0.856
SapurV1A.0834s0160
Salix purpurea
SapurV1A.0834s0160
N
0.856
SapurV1A.1078s0010
Salix purpurea
SapurV1A.1078s0010
N
0.856