CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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foxo1.L
(
Xenopus laevis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
XB-GENE-482532
T189680_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxo6
M00798_2.00
Mus musculus
NNNNHHRYDN
NHRYDDNNNN
PBM
Weirauch et al.(2013)
pTH3477
0.802
0.867
FOXO6
M03049_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_1
0.802
0.867
FOXO6
M03050_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_2
0.802
0.867
FOXO6
M03051_2.00
Homo sapiens
TTTCCCCACACGMC
GKCGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO6_3
0.802
0.867
Foxo3
M00797_2.00
Mus musculus
RTMAACAN
NTGTTKAY
PBM
Weirauch et al.(2013)
pTH3749
0.799
0.867
FOXO3
M03019_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_1
0.799
0.867
FOXO3
M03020_2.00
Homo sapiens
GTAAACAW
WTGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_2
0.799
0.867
FOXO3
M03021_2.00
Homo sapiens
KTTCCCCACAC
GTGTGGGGAAM
SELEX
Jolma et al.(2013)
FOXO3_3
0.799
0.867
FOXO3
M04813_2.00
Homo sapiens
HHCCCCACACN
NGTGTGGGGDD
SELEX
Yin et al.(2017)
FOXO3_eDBD_HT-SELEX
0.799
0.867
FOXO3
M09087_2.00
Homo sapiens
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_HUMAN.H11MO.0.B
0.799
0.867
Foxo3
M09110_2.00
Mus musculus
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_MOUSE.H11MO.0.B
0.799
0.867
FOXO3
M10537_2.00
Homo sapiens
WAHGTAAACAAVND
HNBTTGTTTACDWW
Transfac
Matys et al.(2006)
V$FOXO3_01
0.799
0.867
FOXO3
M10538_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q1
0.799
0.867
FOXO3
M10539_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q3
0.799
0.867
FOXO3
M04814_2.00
Homo sapiens
NHCCCCACACV
BGTGTGGGGDN
SELEX
Yin et al.(2017)
FOXO3_eDBD_Methyl-HT-SELEX
0.799
0.867
Foxo1
M00795_2.00
Mus musculus
NRWMAACAN
NTGTTKWYN
PBM
Weirauch et al.(2013)
pTH3846
0.792
0.916
FOXO1
M03022_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
FOXO1_1
0.792
0.916
FOXO1
M03023_2.00
Homo sapiens
GTAAACATGTTTAY
RTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO1_2
0.792
0.916
FOXO1
M03024_2.00
Homo sapiens
TTTCCCCACACD
HGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO1_3
0.792
0.916
Foxo1
M08122_2.00
Mus musculus
DGTAAACARSH
DSYTGTTTACH
ChIP-seq
Mathelier et al.(2014)
MA0480.1
0.792
0.916
FOXO1
M09091_2.00
Homo sapiens
NRDAAACAVVVN
NBBBTGTTTHYN
Misc
Kulakovskiy et al.(2013)
FOXO1_HUMAN.H11MO.0.A
0.792
0.916
Foxo1
M09108_2.00
Mus musculus
RWMAACAVVN
NBBTGTTKWY
Misc
Kulakovskiy et al.(2013)
FOXO1_MOUSE.H11MO.0.A
0.792
0.916
Foxo1
M09547_2.00
Mus musculus
GTAAACAV
BTGTTTAC
Misc
Heinz et al.(2010)
RAW-Foxo1_Fan_et_al.
0.792
0.916
FOXO1
M10549_2.00
Homo sapiens
NVWAAACAMN
NKTGTTTWBN
Transfac
Matys et al.(2006)
V$FOXO1_01
0.792
0.916
FOXO1
M10550_2.00
Homo sapiens
VNHGTAAACAANHH
DDNTTGTTTACDNB
Transfac
Matys et al.(2006)
V$FOXO1_02
0.792
0.916
FOXO1
M10551_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_03
0.792
0.916
FOXO1
M10552_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_04
0.792
0.916
FOXO1
M10553_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q3
0.792
0.916
FOXO1
M10554_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q5
0.792
0.916
Foxo4
M00794_2.00
Mus musculus
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2013)
pTH3731
0.792
0.831
Foxo4
M09107_2.00
Mus musculus
MVWAAACAA
TTGTTTWBK
Misc
Kulakovskiy et al.(2013)
FOXO4_MOUSE.H11MO.0.C
0.792
0.831
daf-16
M01989_2.00
Caenorhabditis elegans
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2014)
pTH8995
0.775
0.699
foxo
M06198_2.00
Drosophila melanogaster
YVRWAAACA
TGTTTWYBR
B1H
Zhu et al.(2011)
foxo_SANGER_10_FBgn0038197
0.750
0.771
FOXO4
M03039_2.00
Homo sapiens
GTMAACATGTTKAC
GTMAACATGTTKAC
SELEX
Jolma et al.(2013)
FOXO4_1
0.678
0.759
FOXO4
M03040_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXO4_2
0.678
0.759
FOXO4
M03041_2.00
Homo sapiens
WTTCCCCACACR
YGTGTGGGGAAW
SELEX
Jolma et al.(2013)
FOXO4_3
0.678
0.759
FOXO4
M04849_2.00
Homo sapiens
VBGYMMACAN
NTGTKKRCVB
SELEX
Yin et al.(2017)
FOXO4_eDBD_HT-SELEX
0.678
0.759
FOXO4
M09097_2.00
Homo sapiens
MVWAAACAA
TTGTTTWBK
Misc
Kulakovskiy et al.(2013)
FOXO4_HUMAN.H11MO.0.C
0.678
0.759
FOXO4
M10562_2.00
Homo sapiens
VWAAACAHNHH
DDNDTGTTTWB
Transfac
Matys et al.(2006)
V$FOXO4_01
0.678
0.759
FOXO4
M10563_2.00
Homo sapiens
NWNGTAAACAAMNN
NNKTTGTTTACNWN
Transfac
Matys et al.(2006)
V$FOXO4_02
0.678
0.759
FOXO4
M04850_2.00
Homo sapiens
NNGTMMACAN
NTGTKKACNN
SELEX
Yin et al.(2017)
FOXO4_eDBD_Methyl-HT-SELEX
0.678
0.759
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.665
0.446
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.665
0.446
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.665
0.446
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.665
0.446
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.665
0.446
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.665
0.446
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.665
0.446
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.665
0.446
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.665
0.446
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.665
0.446
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAH04456
Forkhead
150
240
GNLSYADLISQAIESSPEKRLTLSQIYDWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHSKFVRVQNEGTGKSSWWILNPEGGKNGKSPR
Links
Other
Forkhead
family TFs
Other
Xenopus laevis
TFs
317 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29613.m000377
Ricinus communis
29613.m000377
I
29613.m000379
Ricinus communis
29613.m000379
I
AMTR_s00024p00159910
Amborella trichopoda
AMTR_s00024p00159910
I
Aquca_014_00855
Aquilegia coerulea
Aquca_014_00855
I
AT2G42040
Arabidopsis thaliana
AT2G42040
D
BGIOSGA005516
Oryza indica
BGIOSGA005516
I
BGIOSGA022518
Oryza indica
BGIOSGA022518
I
Bo3g035920
Brassica oleracea
Bo3g035920
I
Bo4g014690
Brassica oleracea
Bo4g014690
I
Bo4g191280
Brassica oleracea
Bo4g191280
I
Bostr.25993s0574
Boechera stricta
Bostr.25993s0574
I
Bra000251
Brassica rapa
Bra000251
I
Bra004667
Brassica rapa
Bra004667
I
Bra016897
Brassica rapa
Bra016897
I
BRADI1G46270
Brachypodium distachyon
BRADI1G46270
I
Cagra.13389s0020
Capsella grandiflora
Cagra.13389s0020
I
Carubv10023878m.g
Capsella rubella
Carubv10023878m.g
I
cassava31648.valid.m1
Manihot esculenta
cassava31648.valid.m1
I
cassava36463.valid.m1
Manihot esculenta
cassava36463.valid.m1
I
cassava36464.valid.m1
Manihot esculenta
cassava36464.valid.m1
I
Ca_07320
Cicer arietinum
Ca_07320
I
Ciclev10012160m.g
Citrus clementina
Ciclev10012160m.g
I
Cucsa.242590
Cucumis sativus
Cucsa.242590
I
Eucgr.A02456
Eucalyptus grandis
Eucgr.A02456
I
evm.TU.supercontig_85.54
Carica papaya
evm.TU.supercontig_85.54
I
F775_01928
Aegilops tauschii
F775_01928
I
fgenesh2_kg.4__2350__AT2G42040.1
Arabidopsis lyrata
fgenesh2_kg.4__2350__AT2G42040.1
I
gene00456-v1.0-hybrid
Fragaria vesca
gene00456-v1.0-hybrid
I
GLYMA02G28962
Glycine max
GLYMA02G28962
I
GLYMA03G30170
Glycine max
GLYMA03G30170
I
GLYMA09G16841
Glycine max
GLYMA09G16841
I
GLYMA19G33070
Glycine max
GLYMA19G33070
I
Gorai.002G156300
Gossypium raimondii
Gorai.002G156300
I
Gorai.012G100300
Gossypium raimondii
Gorai.012G100300
I
GRMZM2G134552
Zea mays
GRMZM2G134552
N
GRMZM2G165991
Zea mays
GRMZM2G165991
I
GSMUA_Achr10G29530_001
Musa acuminata
GSMUA_Achr10G29530_001
I
GSMUA_Achr3G07730_001
Musa acuminata
GSMUA_Achr3G07730_001
I
GSMUA_Achr3G20210_001
Musa acuminata
GSMUA_Achr3G20210_001
I
GSMUA_Achr7G18600_001
Musa acuminata
GSMUA_Achr7G18600_001
I
GSMUA_Achr9G15730_001
Musa acuminata
GSMUA_Achr9G15730_001
I
LjT35F01.80.nd
Lotus japonicus
LjT35F01.80.nd
I
LPERR02G28190
Leersia perrieri
LPERR02G28190
I
LPERR06G06210
Leersia perrieri
LPERR06G06210
I
Lus10004164.g
Linum usitatissimum
Lus10004164.g
I
Lus10021062.g
Linum usitatissimum
Lus10021062.g
I
MDP0000121493
Malus domestica
MDP0000121493
I
MDP0000154434
Malus domestica
MDP0000154434
I
mgf007626m
Mimulus guttatus
mgf007626m
I
MLOC_17575
Hordeum vulgare
MLOC_17575
I
MTR_1g054175
Medicago truncatula
MTR_1g054175
I
MTR_7g093350
Medicago truncatula
MTR_7g093350
I
MTR_7g093360
Medicago truncatula
MTR_7g093360
I
OB06G16230
Oryza brachyantha
OB06G16230
I
OBART06G06800
Oryza barthii
OBART06G06800
I
OGLUM02G35430
Oryza glumaepatula
OGLUM02G35430
I
OGLUM06G07170
Oryza glumaepatula
OGLUM06G07170
I
OMERI02G32570
Oryza meridionalis
OMERI02G32570
I
OMERI06G07980
Oryza meridionalis
OMERI06G07980
I
ONIVA02G36360
Oryza nivara
ONIVA02G36360
I
ONIVA06G08110
Oryza nivara
ONIVA06G08110
I
OPUNC02G31650
Oryza punctata
OPUNC02G31650
I
OPUNC06G06450
Oryza punctata
OPUNC06G06450
I
orange1.1g019760m.g
Citrus sinensis
orange1.1g019760m.g
I
ORGLA02G0296600
Oryza glaberrima
ORGLA02G0296600
I
ORGLA06G0063300
Oryza glaberrima
ORGLA06G0063300
I
ORUFI02G35820
Oryza rufipogon
ORUFI02G35820
I
ORUFI06G07050
Oryza rufipogon
ORUFI06G07050
I
OS02G0773600
Oryza sativa
OS02G0773600
I
OS06G0207600
Oryza sativa
OS06G0207600
I
Pavir.Aa00328
Panicum virgatum
Pavir.Aa00328
N
Pavir.J07916
Panicum virgatum
Pavir.J07916
N
Pavir.J23833
Panicum virgatum
Pavir.J23833
I
Pavir.J25248
Panicum virgatum
Pavir.J25248
I
PDK_20s1436981g002
Phoenix dactylifera
PDK_20s1436981g002
I
PGSC0003DMG400023669
Solanum tuberosum
PGSC0003DMG400023669
I
PK26699.1
Cannabis sativa
PK26699.1
I
Pm025936
Prunus mume
Pm025936
I
POPTR_0006s20770
Populus trichocarpa
POPTR_0006s20770
I
POPTR_0006s20790
Populus trichocarpa
POPTR_0006s20790
I
POPTR_0016s05840
Populus trichocarpa
POPTR_0016s05840
I
POPTR_0016s05850
Populus trichocarpa
POPTR_0016s05850
I
PRUPE_ppa016277mg
Prunus persica
PRUPE_ppa016277mg
I
SapurV1A.0251s0220
Salix purpurea
SapurV1A.0251s0220
I
SapurV1A.0251s0230
Salix purpurea
SapurV1A.0251s0230
I
SapurV1A.0854s0090
Salix purpurea
SapurV1A.0854s0090
I
SapurV1A.0854s0100
Salix purpurea
SapurV1A.0854s0100
I
SapurV1A.3188s0010
Salix purpurea
SapurV1A.3188s0010
I
Sb10g006810
Sorghum bicolor
Sb10g006810
I
Si019733m.g
Setaria italica
Si019733m.g
N
Solyc10g080530.1
Solanum lycopersicum
Solyc10g080530.1
I
TCM_024932
Theobroma cacao
TCM_024932
I
Thhalv10017052m.g
Eutrema salsugineum
Thhalv10017052m.g
I
VIT_08s0007g06640
Vitis vinifera
VIT_08s0007g06640
I
VIT_08s0007g06690
Vitis vinifera
VIT_08s0007g06690
I