CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA07G37190
(
Glycine max
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GLYMA07G37190
T193480_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.836
0.861
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN
NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.816
0.861
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.816
0.861
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA07G37190.1
GATA
39
59
CADCGTTKTPLWRGGPAGPKV
GLYMA07G37190.1
GATA
85
102
FQSLCNACGIRSRKKKRA
GLYMA07G37190.2
GATA
39
74
CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRA
Links
Other
GATA
family TFs
Other
Glycine max
TFs
143 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GATA15
Arabidopsis thaliana
AT3G06740
D
0.816
GATA16
Arabidopsis thaliana
AT5G49300
D
0.836
GATA17
Arabidopsis thaliana
AT3G16870
I
0.846
AT4G16141
Arabidopsis thaliana
AT4G16141
I
0.846
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.814
BGIOSGA013867
Oryza indica
BGIOSGA013867
I
0.841
BGIOSGA013869
Oryza indica
BGIOSGA013869
I
0.841
Bo00847s050
Brassica oleracea
Bo00847s050
I
0.847
Bo1g055120
Brassica oleracea
Bo1g055120
I
0.846
Bo1g122970
Brassica oleracea
Bo1g122970
I
0.846
Bo1g147740
Brassica oleracea
Bo1g147740
I
0.807
Bo3g068560
Brassica oleracea
Bo3g068560
I
0.846
Bo5g123610
Brassica oleracea
Bo5g123610
I
0.846
Bo7g092660
Brassica oleracea
Bo7g092660
I
0.816
Bo7g104200
Brassica oleracea
Bo7g104200
I
0.846
Bra012742
Brassica rapa
Bra012742
I
0.846
Bra020650
Brassica rapa
Bra020650
I
0.821
Bra021209
Brassica rapa
Bra021209
I
0.846
Bra022184
Brassica rapa
Bra022184
I
0.846
Bra033533
Brassica rapa
Bra033533
I
0.846
Bra037421
Brassica rapa
Bra037421
I
0.816
Bra040288
Brassica rapa
Bra040288
I
0.807
BRADI1G03020
Brachypodium distachyon
BRADI1G03020
I
0.841
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.814
F775_43556
Aegilops tauschii
F775_43556
I
0.810
fgenesh1_pm.C_scaffold_7002128
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7002128
I
0.846
GATA17
Arabidopsis lyrata
fgenesh2_kg.3__1856__AT3G16870.1
I
0.846
GATA15
Arabidopsis lyrata
fgenesh2_kg.3__690__AT3G06740.1
I
0.816
GLYMA17G03410
Glycine max
GLYMA17G03410
I
0.867
GRMZM2G114775
Zea mays
GRMZM2G114775
I
0.810
LPERR03G33900
Leersia perrieri
LPERR03G33900
I
0.841
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.814
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.814
MTR_4g121110
Medicago truncatula
MTR_4g121110
I
0.862
OB01G55040
Oryza brachyantha
OB01G55040
I
0.814
OBART01G45830
Oryza barthii
OBART01G45830
I
0.814
OBART03G39750
Oryza barthii
OBART03G39750
I
0.841
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.814
OGLUM03G39650
Oryza glumaepatula
OGLUM03G39650
I
0.841
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.814
OLONG_023900
Oryza longistaminata
OLONG_023900
I
0.841
OMERI03G36600
Oryza meridionalis
OMERI03G36600
I
0.841
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.814
ONIVA03G41600
Oryza nivara
ONIVA03G41600
I
0.841
OPUNC03G36900
Oryza punctata
OPUNC03G36900
I
0.841
OPUNC03G36910
Oryza punctata
OPUNC03G36910
I
0.841
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.814
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.814
ORUFI03G41540
Oryza rufipogon
ORUFI03G41540
I
0.841
OS01G0976800
Oryza sativa
OS01G0976800
I
0.814
OS03G0831200
Oryza sativa
OS03G0831200
I
0.841
PGSC0003DMG400002337
Solanum tuberosum
PGSC0003DMG400002337
I
0.843
PGSC0003DMG400004624
Solanum tuberosum
PGSC0003DMG400004624
I
0.865
PGSC0003DMG400023434
Solanum tuberosum
PGSC0003DMG400023434
I
0.851
PGSC0003DMG400024783
Solanum tuberosum
PGSC0003DMG400024783
I
0.814
POPTR_0005s02040
Populus trichocarpa
POPTR_0005s02040
I
0.852
POPTR_0008s22950
Populus trichocarpa
POPTR_0008s22950
I
0.862
POPTR_0010s00360
Populus trichocarpa
POPTR_0010s00360
I
0.862
PRUPE_ppa013171mg
Prunus persica
PRUPE_ppa013171mg
I
0.861
PRUPE_ppa015310mg
Prunus persica
PRUPE_ppa015310mg
I
0.825
Sb01g002270
Sorghum bicolor
Sb01g002270
I
0.810
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.814
GATA16
Arabidopsis lyrata
scaffold_801309.1
I
0.847
Si002983m.g
Setaria italica
Si002983m.g
I
0.814
Si037892m.g
Setaria italica
Si037892m.g
I
0.810
Solyc01g100220.2
Solanum lycopersicum
Solyc01g100220.2
I
0.814
Solyc05g054400.2
Solanum lycopersicum
Solyc05g054400.2
I
0.851
Solyc12g099370.1
Solanum lycopersicum
Solyc12g099370.1
I
0.865
TCM_004753
Theobroma cacao
TCM_004753
I
0.853
TCM_021303
Theobroma cacao
TCM_021303
I
0.861
TCM_026732
Theobroma cacao
TCM_026732
I
0.852
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.814
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.814
Traes_5BL_F258582BB
Triticum aestivum
Traes_5BL_F258582BB
I
0.810
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.814
VIT_05s0077g01450
Vitis vinifera
VIT_05s0077g01450
I
0.865
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.825
Ca_02992
Cicer arietinum
Ca_02992
I
0.862
Cla009422
Citrullus lanatus
Cla009422
I
0.865
Cla022104
Citrullus lanatus
Cla022104
I
0.861
Pm003128
Prunus mume
Pm003128
I
0.825
Pm008287
Prunus mume
Pm008287
I
0.861
29889.m003248
Ricinus communis
29889.m003248
I
0.867
cassava15577.m1
Manihot esculenta
cassava15577.m1
I
0.852
cassava15588.m1
Manihot esculenta
cassava15588.m1
I
0.852
cassava37139.valid.m1
Manihot esculenta
cassava37139.valid.m1
I
0.867
cassava43030.valid.m1
Manihot esculenta
cassava43030.valid.m1
I
0.861
Cucsa.069460
Cucumis sativus
Cucsa.069460
I
0.865
Cucsa.252730
Cucumis sativus
Cucsa.252730
I
0.861
mgf003937m
Mimulus guttatus
mgf003937m
I
0.861
mgf022078m
Mimulus guttatus
mgf022078m
I
0.827
Bostr.15774s0060
Boechera stricta
Bostr.15774s0060
I
0.847
Bostr.22252s0362
Boechera stricta
Bostr.22252s0362
I
0.816
Bostr.28625s0006
Boechera stricta
Bostr.28625s0006
I
0.846
Bostr.30275s0055
Boechera stricta
Bostr.30275s0055
I
0.846
Cagra.0053s0014
Capsella grandiflora
Cagra.0053s0014
I
0.846
Cagra.0133s0025
Capsella grandiflora
Cagra.0133s0025
I
0.816
Cagra.5497s0020
Capsella grandiflora
Cagra.5497s0020
I
0.846
Carubv10005860m.g
Capsella rubella
Carubv10005860m.g
I
0.846
Carubv10014665m.g
Capsella rubella
Carubv10014665m.g
I
0.846
Carubv10014841m.g
Capsella rubella
Carubv10014841m.g
I
0.816
Carubv10027332m.g
Capsella rubella
Carubv10027332m.g
I
0.847
Ciclev10003698m.g
Citrus clementina
Ciclev10003698m.g
I
0.853
Ciclev10006161m.g
Citrus clementina
Ciclev10006161m.g
I
0.865
Ciclev10022856m.g
Citrus clementina
Ciclev10022856m.g
I
0.827
Eucgr.A00193
Eucalyptus grandis
Eucgr.A00193
I
0.861
Eucgr.H04023
Eucalyptus grandis
Eucgr.H04023
I
0.865
evm.TU.supercontig_151.51
Carica papaya
evm.TU.supercontig_151.51
I
0.852
evm.TU.supercontig_48.133
Carica papaya
evm.TU.supercontig_48.133
I
0.852
evm.TU.supercontig_9.102
Carica papaya
evm.TU.supercontig_9.102
I
0.861
gene05175-v1.0-hybrid
Fragaria vesca
gene05175-v1.0-hybrid
I
0.861
Gorai.002G029400
Gossypium raimondii
Gorai.002G029400
I
0.816
Gorai.005G065300
Gossypium raimondii
Gorai.005G065300
I
0.861
Gorai.007G125000
Gossypium raimondii
Gorai.007G125000
I
0.852
Gorai.008G142200
Gossypium raimondii
Gorai.008G142200
I
0.853
Gorai.013G127900
Gossypium raimondii
Gorai.013G127900
I
0.852
Lus10016849.g
Linum usitatissimum
Lus10016849.g
I
0.861
Lus10031464.g
Linum usitatissimum
Lus10031464.g
I
0.833
Lus10037721.g
Linum usitatissimum
Lus10037721.g
I
0.861
MDP0000309902
Malus domestica
MDP0000309902
I
0.833
orange1.1g030971m.g
Citrus sinensis
orange1.1g030971m.g
I
0.853
orange1.1g032112m.g
Citrus sinensis
orange1.1g032112m.g
I
0.865
orange1.1g033001m.g
Citrus sinensis
orange1.1g033001m.g
I
0.827
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.814
Pavir.J03766
Panicum virgatum
Pavir.J03766
I
0.810
Pavir.J12379
Panicum virgatum
Pavir.J12379
I
0.810
SapurV1A.0107s0060
Salix purpurea
SapurV1A.0107s0060
I
0.852
SapurV1A.0186s0560
Salix purpurea
SapurV1A.0186s0560
I
0.852
SapurV1A.0739s0060
Salix purpurea
SapurV1A.0739s0060
I
0.862
SapurV1A.2413s0010
Salix purpurea
SapurV1A.2413s0010
I
0.862
Thhalv10005103m.g
Eutrema salsugineum
Thhalv10005103m.g
I
0.847
Thhalv10021612m.g
Eutrema salsugineum
Thhalv10021612m.g
I
0.846
Thhalv10021708m.g
Eutrema salsugineum
Thhalv10021708m.g
I
0.816
Thhalv10026300m.g
Eutrema salsugineum
Thhalv10026300m.g
I
0.846
PK18820.1
Cannabis sativa
PK18820.1
I
0.865
PK21934.1
Cannabis sativa
PK21934.1
I
0.838
LjSGA_011217.1
Lotus japonicus
LjSGA_011217.1
I
0.862
AMTR_s00147p00053080
Amborella trichopoda
AMTR_s00147p00053080
N
0.811
Solyc01g060490.2
Solanum lycopersicum
Solyc01g060490.2
N
0.812
30128.m008883
Ricinus communis
30128.m008883
N
0.812
Aquca_003_00608
Aquilegia coerulea
Aquca_003_00608
N
0.811
Lus10020684.g
Linum usitatissimum
Lus10020684.g
N
0.807
Lus10029863.g
Linum usitatissimum
Lus10029863.g
N
0.807