GSMUA_Achr11G17770_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr11G17770_001 T193586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA19
M06893_2.00
Arabidopsis thaliana
BNGATCBGATY

RATCVGATCNV
Dap-seq
OMalley et al.(2016)
GATA19_col_a
0.806 0.694
GATA19
M06894_2.00
Arabidopsis thaliana
HNGATCBGATY

RATCVGATCND
Dap-seq
OMalley et al.(2016)
GATA19_colamp_a
0.806 0.694
GATA20
M06884_2.00
Arabidopsis thaliana
GATCBGAT

ATCVGATC
Dap-seq
OMalley et al.(2016)
GATA20_col_a
0.806 0.694
GATA20
M06885_2.00
Arabidopsis thaliana
HNGATCNGATBND

HNVATCNGATCND
Dap-seq
OMalley et al.(2016)
GATA20_colamp_a
0.806 0.694
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P17770_001 GATA 59 94

Links

Other GATA family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action