CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si004417m.g
(
Setaria italica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Si004417m.g
T195198_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si004417m
GATA
95
130
CVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQ
Links
Other
GATA
family TFs
Other
Setaria italica
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GATA23
Arabidopsis thaliana
AT5G26930
N
0.808
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
0.847
BRADI2G35057
Brachypodium distachyon
BRADI2G35057
N
0.862
LPERR01G13070
Leersia perrieri
LPERR01G13070
N
0.867
OBART01G14380
Oryza barthii
OBART01G14380
N
0.867
OBART05G03900
Oryza barthii
OBART05G03900
N
0.853
OB01G24090
Oryza brachyantha
OB01G24090
N
0.867
OB05G13650
Oryza brachyantha
OB05G13650
N
0.853
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
0.853
ORGLA01G0118700
Oryza glaberrima
ORGLA01G0118700
N
0.867
OGLUM01G16180
Oryza glumaepatula
OGLUM01G16180
N
0.867
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
0.853
OLONG_020882
Oryza longistaminata
OLONG_020882
N
0.853
ONIVA04G04160
Oryza nivara
ONIVA04G04160
N
0.867
OPUNC01G14080
Oryza punctata
OPUNC01G14080
N
0.867
OPUNC05G03600
Oryza punctata
OPUNC05G03600
N
0.853
ORUFI01G16060
Oryza rufipogon
ORUFI01G16060
N
0.867
OS01G0343300
Oryza sativa
OS01G0343300
N
0.867
OS05G0155400
Oryza sativa
OS05G0155400
N
0.853
Pavir.Ea01306
Panicum virgatum
Pavir.Ea01306
N
0.867
Pavir.Eb02364
Panicum virgatum
Pavir.Eb02364
N
0.867
Pavir.J31164
Panicum virgatum
Pavir.J31164
N
0.848
Pavir.J34225
Panicum virgatum
Pavir.J34225
N
0.450
Si011269m.g
Setaria italica
Si011269m.g
N
0.848
Sb03g013700
Sorghum bicolor
Sb03g013700
N
0.867
Sb09g004315
Sorghum bicolor
Sb09g004315
N
0.848
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
0.848
GRMZM2G104390
Zea mays
GRMZM2G104390
N
0.867
GRMZM2G052616
Zea mays
GRMZM2G052616
N
0.867