Solyc10g047640.1 (Solanum lycopersicum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Solyc10g047640.1 T195314_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g047640.1.1 GATA 225 262

Links

Other GATA family TFs
Other Solanum lycopersicum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.852
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.852
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.848
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.848
TCM_034530 Theobroma cacao TCM_034530 N 0.837
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.837
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.837
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.837
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.837
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.837
GSMUA_Achr10G07970_001 Musa acuminata GSMUA_Achr10G07970_001 N 0.835
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N 0.820
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.815
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.815
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.815
29596.m000720 Ricinus communis 29596.m000720 N 0.815
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.815
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.815
PK04210.1 Cannabis sativa PK04210.1 N 0.815
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.815
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.814
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.810
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.810
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.810
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.810
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.810
Ca_14968 Cicer arietinum Ca_14968 N 0.810
Pm004390 Prunus mume Pm004390 N 0.810
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.810
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.810
MDP0000303048 Malus domestica MDP0000303048 N 0.810
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.810
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.810
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.809