VIT_09s0054g00440 (Vitis vinifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 VIT_09s0054g00440 T195676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.851 0.944
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.851 0.889
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.851 0.889
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.851 0.861
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.815 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_09s0054g00440.t01 GATA 220 257

Links

Other GATA family TFs
Other Vitis vinifera TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000772401 Angiostrongylus cantonensis ACAC_0000772401 I
ACOC_0000013301 Angiostrongylus costaricensis ACOC_0000013301 I
Alligator_sinensis_CCG003246.1 Alligator sinensis Alligator_sinensis_CCG003246.1 N
ANCCAN_30535 Ancylostoma caninum ANCCAN_30535 I
ANCCEY_07256 Ancylostoma ceylanicum ANCCEY_07256 I
ASU_00906 Ascaris suum ASU_00906 I
BGLB003447 Biomphalaria glabrata BGLB003447 I
BTMF_0001614201 Brugia timori BTMF_0001614201 I
BXY_1193200 Bursaphelenchus xylophilus BXY_1193200 I
CapteG111555 Capitella teleta CapteG111555 I
CapteG82802 Capitella teleta CapteG82802 I
CGI_10003726 Crassostrea gigas CGI_10003726 I
CGI_10006159 Crassostrea gigas CGI_10006159 I
CGOC_0000329701 Cylicostephanus goldi CGOC_0000329701 I
CLEC001579 Cimex lectularius CLEC001579 I
Cmyd_10015602 Chelonia mydas Cmyd_10015602 N
D915_07563 Fasciola hepatica D915_07563 I
D917_06283 Trichinella nativa D917_06283 I
D918_04073 Trichuris suis D918_04073 I
DAPPUDRAFT_50302 Daphnia pulex DAPPUDRAFT_50302 I
DICVIV_08747 Dictyocaulus viviparus DICVIV_08747 I
DME_0000296101 Dracunculus medinensis DME_0000296101 I
EEL_0000313101 Elaeophora elaphi EEL_0000313101 I
ENSLACG00000010819 Latimeria chalumnae ENSLACG00000010819 N
ENSONIG00000004794 Oreochromis niloticus ENSONIG00000004794 N
ENSPFOG00000001440 Poecilia formosa ENSPFOG00000001440 N
ENSXMAG00000012768 Xiphophorus maculatus ENSXMAG00000012768 N
estExt_fgenesh2_kg.C_80001 Branchiostoma floridae estExt_fgenesh2_kg.C_80001 I
estExt_fgenesh2_pg.C_1200108 Branchiostoma floridae estExt_fgenesh2_pg.C_1200108 I
fd102C Drosophila melanogaster FBgn0039937 D
foxq2 Danio rerio ENSDARG00000071394 N
foxq2 Oryzias latipes ENSORLG00000004973 N
GE14501 Drosophila yakuba FBgn0232105 I
GG16435 Drosophila erecta FBgn0108666 I
GM26767 Drosophila sechellia FBgn0181620 I
GPUH_0002128801 Gongylonema pulchrum GPUH_0002128801 I
HCOI02176800 Haemonchus contortus HCOI02176800 I
HDID_0000955901 Hymenolepis diminuta HDID_0000955901 I
HelroG146879 Helobdella robusta HelroG146879 I
HelroG84905 Helobdella robusta HelroG84905 I
HmN_000125600 Hymenolepis microstoma HmN_000125600 I
HNAJ_0000218001 Hymenolepis nana HNAJ_0000218001 I
HPBE_0001940301 Heligmosomoides bakeri HPBE_0001940301 I
HPLM_0001940801 Haemonchus placei HPLM_0001940801 I
KGM_06490 Danaus plexippus KGM_06490 I
L596_g8980 Steinernema carpocapsae L596_g8980 I
L889_g23699 Steinernema feltiae L889_g23699 I
L892_g5229 Steinernema scapterisci L892_g5229 I
L893_g32272 Steinernema glaseri L893_g32272 I
L898_g16488 Steinernema monticolum L898_g16488 I
LotgiG69928 Lottia gigantea LotgiG69928 I
LotgiG79770 Lottia gigantea LotgiG79770 I
LotgiG79781 Lottia gigantea LotgiG79781 I
LotgiG99434 Lottia gigantea LotgiG99434 I
MESCA005623 Megaselia scalaris MESCA005623 I
NBR_0000095001 Nippostrongylus brasiliensis NBR_0000095001 I
nDi.2.2.2.g05283 Dirofilaria immitis nDi.2.2.2.g05283 I
NECAME_04384 Necator americanus NECAME_04384 I
NEMVEDRAFT_v1g125256 Nematostella vectensis NEMVEDRAFT_v1g125256 I
NEMVEDRAFT_v1g59063 Nematostella vectensis NEMVEDRAFT_v1g59063 I
nOo.2.0.1.g07936 Onchocerca ochengi nOo.2.0.1.g07936 I
Ocbimv22038677m.g Octopus bimaculoides Ocbimv22038677m.g I
OESDEN_02306 Oesophagostomum dentatum OESDEN_02306 I
Ogr12164 Ophisaurus gracilis Ogr12164 N
Pvit_09831 Pogona vitticeps Pvit_09831 N
Sakowv30023329m.g Saccoglossus kowalevskii Sakowv30023329m.g I
Sakowv30023336m.g Saccoglossus kowalevskii Sakowv30023336m.g I
Sakowv30044994m.g Saccoglossus kowalevskii Sakowv30044994m.g N
SBAD_0000682701 Soboliphyme baturini SBAD_0000682701 I
SMAR012448 Strigamia maritima SMAR012448 I
SMU15004452 Schmidtea mediterranea SMU15004452 I
SPU_012384 Strongylocentrotus purpuratus SPU_012384 N
SPU_019002 Strongylocentrotus purpuratus SPU_019002 N
SVUK_0000095001 Strongylus vulgaris SVUK_0000095001 I
TCLT_0000158601 Thelazia callipaeda TCLT_0000158601 I
TCNE_0000717001 Toxocara canis TCNE_0000717001 I
TMUE_s0045003300 Trichuris muris TMUE_s0045003300 I
TTRE_0000002201 Trichuris trichiura TTRE_0000002201 I
WBGene00238063 Onchocerca volvulus WBGene00238063 I
WUBG_10187 Wuchereria bancrofti WUBG_10187 I
XP_002159677.1 Hydra magnipapillata XP_002159677.1 I