CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla005266
(
Citrullus lanatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Cla005266
T195869_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla005266
GATA
19
53
CVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRI
Links
Other
GATA
family TFs
Other
Citrullus lanatus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS01G0976800
Oryza sativa
OS01G0976800
I
0.828
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.828
orange1.1g030971m.g
Citrus sinensis
orange1.1g030971m.g
I
0.814
Ciclev10003698m.g
Citrus clementina
Ciclev10003698m.g
I
0.814
Pm003128
Prunus mume
Pm003128
I
0.827
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.828
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.828
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.828
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.828
Si002983m.g
Setaria italica
Si002983m.g
I
0.828
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.828
PRUPE_ppa015310mg
Prunus persica
PRUPE_ppa015310mg
I
0.827
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.828
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.828
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.828
Bra020650
Brassica rapa
Bra020650
I
0.823
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.839
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.828
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.828
OB01G55040
Oryza brachyantha
OB01G55040
I
0.828
OBART01G45830
Oryza barthii
OBART01G45830
I
0.828
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.828
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.828
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.828
MTR_2g038720
Medicago truncatula
MTR_2g038720
N
0.812
GSMUA_Achr7G03800_001
Musa acuminata
GSMUA_Achr7G03800_001
N
0.807
mgf011737m
Mimulus guttatus
mgf011737m
N
0.814
Gorai.013G206400
Gossypium raimondii
Gorai.013G206400
N
0.814
Lus10020684.g
Linum usitatissimum
Lus10020684.g
N
0.823
Lus10029863.g
Linum usitatissimum
Lus10029863.g
N
0.823
AMTR_s00147p00053080
Amborella trichopoda
AMTR_s00147p00053080
N
0.828