CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_8110001
(
Dictyostelium purpureum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_Genewise1.C_8110001
T196168_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaC
M02009_2.00
Dictyostelium discoideum
HMGATCGW
WCGATCKD
PBM
Weirauch et al.(2014)
pTH5525
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_8110001
GATA
473
508
CIFCGTMETPEWRKGPGGHKTLCNACGLHYAKNIKK
Links
Other
GATA
family TFs
Other
Dictyostelium purpureum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gtaC
Dictyostelium discoideum
DDB_G0277589
D
0.867
EFA80915.1
Polysphondylium pallidum
EFA80915.1
I
0.867
EFA84076.1
Polysphondylium pallidum
EFA84076.1
I
0.805