CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh4_pg.C_scaffold_1000626
(
Volvox carteri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
fgenesh4_pg.C_scaffold_1000626
T196225_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh4_pg.C_scaffold_1000626
GATA
496
530
CANCGTTQTPLWRKDRVTGDTVCNACGIYKQTHGF
Links
Other
GATA
family TFs
Other
Volvox carteri
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHLREDRAFT_142190
Chlamydomonas reinhardtii
CHLREDRAFT_142190
N
0.856
estExt_fgenesh5_synt.C_10279
Volvox carteri
estExt_fgenesh5_synt.C_10279
N
0.856