CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022078m
(
Mimulus guttatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
mgf022078m
T196341_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.823
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022078m
GATA
2
37
CSDCSTTKTPLWRGGPSGPKSLCNACGIKYNKKRRQ
Links
Other
GATA
family TFs
Other
Mimulus guttatus
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action