CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022078m
(
Mimulus guttatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
mgf022078m
T196341_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.823
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022078m
GATA
2
37
CSDCSTTKTPLWRGGPSGPKSLCNACGIKYNKKRRQ
Links
Other
GATA
family TFs
Other
Mimulus guttatus
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_43556
Aegilops tauschii
F775_43556
I
0.822
Aquca_003_00608
Aquilegia coerulea
Aquca_003_00608
N
0.816
fgenesh1_pm.C_scaffold_7002128
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7002128
I
0.838
GATA17
Arabidopsis lyrata
fgenesh2_kg.3__1856__AT3G16870.1
I
0.838
GATA16
Arabidopsis lyrata
scaffold_801309.1
I
0.823
GATA17
Arabidopsis thaliana
AT3G16870
I
0.838
AT4G16141
Arabidopsis thaliana
AT4G16141
I
0.838
GATA16
Arabidopsis thaliana
AT5G49300
D
0.823
Bostr.15774s0060
Boechera stricta
Bostr.15774s0060
I
0.823
Bostr.28625s0006
Boechera stricta
Bostr.28625s0006
I
0.838
Bostr.30275s0055
Boechera stricta
Bostr.30275s0055
I
0.838
BRADI1G03020
Brachypodium distachyon
BRADI1G03020
I
0.842
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.815
Bo00847s050
Brassica oleracea
Bo00847s050
I
0.823
Bo1g055120
Brassica oleracea
Bo1g055120
I
0.838
Bo1g122970
Brassica oleracea
Bo1g122970
I
0.838
Bo3g068560
Brassica oleracea
Bo3g068560
I
0.838
Bo5g123610
Brassica oleracea
Bo5g123610
I
0.836
Bo7g104200
Brassica oleracea
Bo7g104200
I
0.838
Bra012742
Brassica rapa
Bra012742
I
0.838
Bra021209
Brassica rapa
Bra021209
I
0.838
Bra022184
Brassica rapa
Bra022184
I
0.838
Bra033533
Brassica rapa
Bra033533
I
0.838
PK18820.1
Cannabis sativa
PK18820.1
I
0.828
PK21934.1
Cannabis sativa
PK21934.1
I
0.826
Cagra.0053s0014
Capsella grandiflora
Cagra.0053s0014
I
0.838
Cagra.5497s0020
Capsella grandiflora
Cagra.5497s0020
I
0.838
Carubv10005860m.g
Capsella rubella
Carubv10005860m.g
I
0.838
Carubv10014665m.g
Capsella rubella
Carubv10014665m.g
I
0.838
Carubv10027332m.g
Capsella rubella
Carubv10027332m.g
I
0.823
evm.TU.supercontig_151.51
Carica papaya
evm.TU.supercontig_151.51
I
0.842
evm.TU.supercontig_48.133
Carica papaya
evm.TU.supercontig_48.133
I
0.842
evm.TU.supercontig_9.102
Carica papaya
evm.TU.supercontig_9.102
I
0.823
Ca_02992
Cicer arietinum
Ca_02992
I
0.822
Cla009422
Citrullus lanatus
Cla009422
I
0.828
Cla022104
Citrullus lanatus
Cla022104
I
0.823
Ciclev10003698m.g
Citrus clementina
Ciclev10003698m.g
I
0.827
Ciclev10006161m.g
Citrus clementina
Ciclev10006161m.g
I
0.828
Ciclev10022856m.g
Citrus clementina
Ciclev10022856m.g
I
0.814
orange1.1g030971m.g
Citrus sinensis
orange1.1g030971m.g
I
0.827
orange1.1g032112m.g
Citrus sinensis
orange1.1g032112m.g
I
0.828
orange1.1g033001m.g
Citrus sinensis
orange1.1g033001m.g
I
0.814
Cucsa.069460
Cucumis sativus
Cucsa.069460
I
0.828
Cucsa.252730
Cucumis sativus
Cucsa.252730
I
0.823
Eucgr.A00193
Eucalyptus grandis
Eucgr.A00193
I
0.823
Eucgr.H04023
Eucalyptus grandis
Eucgr.H04023
I
0.828
Thhalv10005103m.g
Eutrema salsugineum
Thhalv10005103m.g
I
0.823
Thhalv10021612m.g
Eutrema salsugineum
Thhalv10021612m.g
I
0.838
Thhalv10026300m.g
Eutrema salsugineum
Thhalv10026300m.g
I
0.838
gene05175-v1.0-hybrid
Fragaria vesca
gene05175-v1.0-hybrid
I
0.823
GLYMA07G37190
Glycine max
GLYMA07G37190
I
0.827
GLYMA17G03410
Glycine max
GLYMA17G03410
I
0.827
Gorai.002G029400
Gossypium raimondii
Gorai.002G029400
I
0.807
Gorai.005G065300
Gossypium raimondii
Gorai.005G065300
I
0.823
Gorai.007G125000
Gossypium raimondii
Gorai.007G125000
I
0.840
Gorai.008G142200
Gossypium raimondii
Gorai.008G142200
I
0.827
Gorai.013G127900
Gossypium raimondii
Gorai.013G127900
I
0.842
Gorai.013G206400
Gossypium raimondii
Gorai.013G206400
N
0.840
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.815
LPERR03G33900
Leersia perrieri
LPERR03G33900
I
0.852
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.815
Lus10016849.g
Linum usitatissimum
Lus10016849.g
I
0.823
Lus10031464.g
Linum usitatissimum
Lus10031464.g
I
0.821
Lus10037721.g
Linum usitatissimum
Lus10037721.g
I
0.823
LjSGA_011217.1
Lotus japonicus
LjSGA_011217.1
I
0.822
MDP0000309902
Malus domestica
MDP0000309902
I
0.821
cassava15577.m1
Manihot esculenta
cassava15577.m1
I
0.842
cassava15588.m1
Manihot esculenta
cassava15588.m1
I
0.842
cassava37139.valid.m1
Manihot esculenta
cassava37139.valid.m1
I
0.827
cassava43030.valid.m1
Manihot esculenta
cassava43030.valid.m1
I
0.823
MTR_4g121110
Medicago truncatula
MTR_4g121110
I
0.822
mgf003937m
Mimulus guttatus
mgf003937m
I
0.823
mgf011737m
Mimulus guttatus
mgf011737m
N
0.812
GSMUA_Achr1G14780_001
Musa acuminata
GSMUA_Achr1G14780_001
N
0.810
OBART01G45830
Oryza barthii
OBART01G45830
I
0.815
OBART03G39750
Oryza barthii
OBART03G39750
I
0.852
OB01G55040
Oryza brachyantha
OB01G55040
I
0.815
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.815
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.815
OGLUM03G39650
Oryza glumaepatula
OGLUM03G39650
I
0.852
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.815
BGIOSGA013867
Oryza indica
BGIOSGA013867
I
0.852
BGIOSGA013869
Oryza indica
BGIOSGA013869
I
0.852
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.815
OLONG_023900
Oryza longistaminata
OLONG_023900
I
0.852
OMERI03G36600
Oryza meridionalis
OMERI03G36600
I
0.852
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.815
ONIVA03G41600
Oryza nivara
ONIVA03G41600
I
0.852
OPUNC03G36900
Oryza punctata
OPUNC03G36900
I
0.852
OPUNC03G36910
Oryza punctata
OPUNC03G36910
I
0.852
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.815
ORUFI03G41540
Oryza rufipogon
ORUFI03G41540
I
0.852
OS01G0976800
Oryza sativa
OS01G0976800
I
0.815
OS03G0831200
Oryza sativa
OS03G0831200
I
0.852
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.815
Pavir.J03766
Panicum virgatum
Pavir.J03766
I
0.811
Pavir.J12379
Panicum virgatum
Pavir.J12379
I
0.811
POPTR_0005s02040
Populus trichocarpa
POPTR_0005s02040
I
0.842
POPTR_0008s22950
Populus trichocarpa
POPTR_0008s22950
I
0.822
POPTR_0010s00360
Populus trichocarpa
POPTR_0010s00360
I
0.822
Pm008287
Prunus mume
Pm008287
I
0.823
PRUPE_ppa013171mg
Prunus persica
PRUPE_ppa013171mg
I
0.823
29889.m003248
Ricinus communis
29889.m003248
I
0.827
SapurV1A.0107s0060
Salix purpurea
SapurV1A.0107s0060
I
0.842
SapurV1A.0186s0560
Salix purpurea
SapurV1A.0186s0560
I
0.842
SapurV1A.0739s0060
Salix purpurea
SapurV1A.0739s0060
I
0.822
SapurV1A.2413s0010
Salix purpurea
SapurV1A.2413s0010
I
0.822
Si002983m.g
Setaria italica
Si002983m.g
I
0.815
Si037892m.g
Setaria italica
Si037892m.g
I
0.811
Solyc01g100220.2
Solanum lycopersicum
Solyc01g100220.2
I
0.851
Solyc05g054400.2
Solanum lycopersicum
Solyc05g054400.2
I
0.842
Solyc09g075610.2
Solanum lycopersicum
Solyc09g075610.2
N
0.822
Solyc12g099370.1
Solanum lycopersicum
Solyc12g099370.1
I
0.828
PGSC0003DMG400002337
Solanum tuberosum
PGSC0003DMG400002337
I
0.803
PGSC0003DMG400004624
Solanum tuberosum
PGSC0003DMG400004624
I
0.828
PGSC0003DMG400023434
Solanum tuberosum
PGSC0003DMG400023434
I
0.842
PGSC0003DMG400024783
Solanum tuberosum
PGSC0003DMG400024783
I
0.851
PGSC0003DMG400031828
Solanum tuberosum
PGSC0003DMG400031828
N
0.822
Sb01g002270
Sorghum bicolor
Sb01g002270
I
0.811
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.815
TCM_004753
Theobroma cacao
TCM_004753
I
0.827
TCM_021303
Theobroma cacao
TCM_021303
I
0.823
TCM_026732
Theobroma cacao
TCM_026732
I
0.842
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.815
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.815
Traes_5BL_F258582BB
Triticum aestivum
Traes_5BL_F258582BB
I
0.822
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.815
VIT_05s0077g01450
Vitis vinifera
VIT_05s0077g01450
I
0.828
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.815
GRMZM2G114775
Zea mays
GRMZM2G114775
I
0.811