gene26537-v1.0-hybrid (Fragaria vesca)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 gene26537-v1.0-hybrid T196576_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna26537.1-v1.0-hybrid GATA 204 241

Links

Other GATA family TFs
Other Fragaria vesca TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.867
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.867
29596.m000720 Ricinus communis 29596.m000720 N 0.867
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.867
PK04210.1 Cannabis sativa PK04210.1 N 0.867
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.867
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.862
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.862
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.862
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.862
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.862
Ca_14968 Cicer arietinum Ca_14968 N 0.862
Pm004390 Prunus mume Pm004390 N 0.862
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.862
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.862
MDP0000303048 Malus domestica MDP0000303048 N 0.862
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.862
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.862
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.861
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.856
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.848
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.839
TCM_034530 Theobroma cacao TCM_034530 N 0.836
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.836
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.836
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.836
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.836
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.836
Cla022486 Citrullus lanatus Cla022486 N 0.831
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.831
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.815
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.815
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.815
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.810
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.810