CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000309356
(
Malus domestica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
MDP0000309356
T196682_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000309356
GATA
7
42
CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGTL
Links
Other
GATA
family TFs
Other
Malus domestica
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00002p00191340
Amborella trichopoda
AMTR_s00002p00191340
N
0.867
BGIOSGA014620
Oryza indica
BGIOSGA014620
N
0.867
GRMZM2G077002
Zea mays
GRMZM2G077002
N
0.867
GRMZM2G421212
Zea mays
GRMZM2G421212
N
0.867
GSMUA_Achr4G17880_001
Musa acuminata
GSMUA_Achr4G17880_001
N
0.867
LPERR04G16610
Leersia perrieri
LPERR04G16610
N
0.867
OB04G27470
Oryza brachyantha
OB04G27470
N
0.867
OGLUM04G20450
Oryza glumaepatula
OGLUM04G20450
N
0.867
OMERI03G30900
Oryza meridionalis
OMERI03G30900
N
0.867
ONIVA04G18740
Oryza nivara
ONIVA04G18740
N
0.867
OPUNC04G18160
Oryza punctata
OPUNC04G18160
N
0.867
ORGLA04G0175700
Oryza glaberrima
ORGLA04G0175700
N
0.867
ORUFI04G22090
Oryza rufipogon
ORUFI04G22090
N
0.867
OS04G0544500
Oryza sativa
OS04G0544500
N
0.867
PRUPE_ppa003888mg
Prunus persica
PRUPE_ppa003888mg
N
0.867
Sb01g011980
Sorghum bicolor
Sb01g011980
N
0.867
Sb06g024200
Sorghum bicolor
Sb06g024200
N
0.867
Si010863m.g
Setaria italica
Si010863m.g
N
0.867
Pm023342
Prunus mume
Pm023342
N
0.867
Cucsa.313750
Cucumis sativus
Cucsa.313750
N
0.867
Cucsa.321290
Cucumis sativus
Cucsa.321290
N
0.867
Pavir.Ga00650
Panicum virgatum
Pavir.Ga00650
N
0.867
Pavir.Ga01522
Panicum virgatum
Pavir.Ga01522
N
0.867
Pavir.Gb01403
Panicum virgatum
Pavir.Gb01403
N
0.867
Pavir.Gb01197
Panicum virgatum
Pavir.Gb01197
N
0.862
estExt_fgenesh1_pg.C_90243
Physcomitrella patens
estExt_fgenesh1_pg.C_90243
N
0.857
Si011929m.g
Setaria italica
Si011929m.g
N
0.831
AMTR_s00025p00250050
Amborella trichopoda
AMTR_s00025p00250050
N
0.827
PDK_20s1646281g001
Phoenix dactylifera
PDK_20s1646281g001
N
0.827