Sjc_0090760 (Schistosoma japonicum)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 Sjc_0090760 T198190_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.664 0.664
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.664 0.664
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.664 0.664
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.664 0.664
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000008538 GCM 247 376

Links

Other GCM family TFs
Other Schistosoma japonicum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_171130 Schistosoma mansoni Smp_171130 I 0.984
SMRZ_0001689701 Schistosoma margrebowiei SMRZ_0001689701 I 0.984
SMTD_0000548601 Schistosoma mattheei SMTD_0000548601 I 0.984
A_07498 Schistosoma haematobium A_07498 I 0.952
csin108204 Clonorchis sinensis csin108204 I 0.864
D915_04811 Fasciola hepatica D915_04811 I 0.864
ECPE_0000966901 Echinostoma caproni ECPE_0000966901 I 0.864
T265_00115 Opisthorchis viverrini T265_00115 I 0.864
gcm Drosophila melanogaster FBgn0014179 D 0.664
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.664
GG24019 Drosophila erecta FBgn0116158 I 0.664
GL19218 Drosophila persimilis FBgn0156817 I 0.664
GM12386 Drosophila sechellia FBgn0167323 I 0.664
GE10457 Drosophila yakuba FBgn0228318 I 0.664
GF21907 Drosophila ananassae FBgn0098907 I 0.656
MCOS_0000650801 Mesocestoides corti MCOS_0000650801 I 0.656
GH11056 Drosophila grimshawi FBgn0118537 I 0.648
TRE_0001360101 Trichobilharzia regenti TRE_0001360101 I 0.648
GI17574 Drosophila mojavensis FBgn0140318 I 0.640
GJ17916 Drosophila virilis FBgn0205084 I 0.640
GK23810 Drosophila willistoni FBgn0225772 I 0.640
GD22349 Drosophila simulans FBgn0193756 I 0.624
MDOA004732 Musca domestica MDOA004732 I 0.624
TASK_0000418001 Taenia asiatica TASK_0000418001 N 0.616
TsM_000040500 Taenia solium TsM_000040500 N 0.616
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.608