MCOS_0000650801 (Mesocestoides corti)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 MCOS_0000650801 T198252_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.612 0.612
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.612 0.612
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.612 0.612
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.612 0.612
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCOS_0000650801-mRNA-1 GCM 104 239

Links

Other GCM family TFs
Other Mesocestoides corti TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TASK_0000418001 Taenia asiatica TASK_0000418001 N 0.784
ECANG7_01805 Echinococcus canadensis ECANG7_01805 N 0.776
EmuJ_000821700 Echinococcus multilocularis EmuJ_000821700 N 0.776
TsM_000180700 Taenia solium TsM_000180700 N 0.709
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.678
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.675
A_07498 Schistosoma haematobium A_07498 I 0.674
Smp_171130 Schistosoma mansoni Smp_171130 I 0.664
SMRZ_0001689701 Schistosoma margrebowiei SMRZ_0001689701 I 0.664
SMTD_0000548601 Schistosoma mattheei SMTD_0000548601 I 0.664
Sjc_0090760 Schistosoma japonicum Sjc_0090760 I 0.656
csin108204 Clonorchis sinensis csin108204 I 0.642
D915_04811 Fasciola hepatica D915_04811 I 0.642
T265_00115 Opisthorchis viverrini T265_00115 I 0.634
ECPE_0000966901 Echinostoma caproni ECPE_0000966901 I 0.630
SPER_0000189601 Spirometra erinaceieuropaei SPER_0000189601 N 0.625
SPER_0000337001 Spirometra erinaceieuropaei SPER_0000337001 N 0.625
SPER_0002092701 Spirometra erinaceieuropaei SPER_0002092701 N 0.625
SSLN_0000174801 Schistocephalus solidus SSLN_0000174801 N 0.625
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.619
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.612
gcm Drosophila melanogaster FBgn0014179 D 0.612
GI17574 Drosophila mojavensis FBgn0140318 I 0.612
GM12386 Drosophila sechellia FBgn0167323 I 0.612
GJ17916 Drosophila virilis FBgn0205084 I 0.612
PHUM436840 Pediculus humanus PHUM436840 I 0.612
ADIR000711 Anopheles dirus ADIR000711 I 0.612
AFAF005680 Anopheles farauti AFAF005680 I 0.612