SPER_0003947201 (Spirometra erinaceieuropaei)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 SPER_0003947201 T198270_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.630 0.630
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.630 0.630
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.630 0.630
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.630 0.630
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPER_0003947201-mRNA-1 GCM 99 180

Links

Other GCM family TFs
Other Spirometra erinaceieuropaei TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPER_0003407301 Spirometra erinaceieuropaei SPER_0003407301 I 0.988
SPER_0003881901 Spirometra erinaceieuropaei SPER_0003881901 I 0.988
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.862
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.783
AFAF005680 Anopheles farauti AFAF005680 I 0.617