CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001396601
(
Schistosoma rodhaini
)
GCM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03615 (GCM)
IPR003902
SROB_0001396601
T198271_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001396601-mRNA-1
GCM
4
142
YDSYELWPTGHCRRVYAQTCERARRHQSGWAMRNTNNHNPQVLKKSCLGVLECSMNCMVQGKPLSLRPAICDKARKKQCNRECITPGCKGRLILRNCRGHSGYPVTHFWRFANGAVYFEAKGEHDHNRPSLKTFGLSET
Links
Other
GCM
family TFs
Other
Schistosoma rodhaini
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0000094701
Schistosoma curassoni
SCUD_0000094701
N
0.986
Smp_152660
Schistosoma mansoni
Smp_152660
N
0.978
Sjc_0024710
Schistosoma japonicum
Sjc_0024710
N
0.971
TRE_0000926501
Trichobilharzia regenti
TRE_0000926501
N
0.914
csin110955
Clonorchis sinensis
csin110955
N
0.899
T265_07925
Opisthorchis viverrini
T265_07925
N
0.899
A_07348
Schistosoma haematobium
A_07348
N
0.741
SPER_0000189601
Spirometra erinaceieuropaei
SPER_0000189601
N
0.729
SPER_0000337001
Spirometra erinaceieuropaei
SPER_0000337001
N
0.729
SPER_0002092701
Spirometra erinaceieuropaei
SPER_0002092701
N
0.729
SSLN_0000174801
Schistocephalus solidus
SSLN_0000174801
N
0.729
MCOS_0000738101
Mesocestoides corti
MCOS_0000738101
N
0.700
EmuJ_001115800
Echinococcus multilocularis
EmuJ_001115800
N
0.693
TsM_000040500
Taenia solium
TsM_000040500
N
0.686
DILT_0000967601
Diphyllobothrium latum
DILT_0000967601
N
0.660
SPER_0002793601
Spirometra erinaceieuropaei
SPER_0002793601
N
0.656
SPER_0003271801
Spirometra erinaceieuropaei
SPER_0003271801
N
0.652
PXEA_0003348601
Protopolystoma xenopodis
PXEA_0003348601
N
0.630
BGLB002570
Biomphalaria glabrata
BGLB002570
I
0.629